RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 SOCS6O14544 535 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 ZNF264O43296 627 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 APOL3O95236 402 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 IGF2P01344 180 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 LIMS3P0CW19 117 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 LIMS4P0CW20 117 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 ZNF12P17014 697 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 ZNF3P17036 446 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 IDUAP35475 653 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 EFNA3P52797 238 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 RPS3AP61247 264 aaKnown RBP16.24■□□□□ 0.19
SNX1-208ENST00000559844 SKP2Q13309 424 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 ANKDD1AQ495B1 522 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 SOWAHCQ53LP3 525 aaPredicted RBP16.24■□□□□ 0.19
SNX1-208ENST00000559844 FAM69BQ5VUD6 431 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 C9orf40Q8IXQ3 194 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 KLHL36Q8N4N3 616 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 UFD1Q92890 307 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 OTULINQ96BN8 352 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 C3orf49Q96BT1 292 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 HSPBAP1Q96EW2 488 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 TNFRSF13CQ96RJ3 184 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 SPSB2Q99619 263 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 ARHGAP9Q9BRR9 750 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 RNF167Q9H6Y7 350 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 MCCC2Q9HCC0 563 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 NXT1Q9UKK6 140 aaKnown RBP16.24■□□□□ 0.19
SNX1-208ENST00000559844 SPIN1Q9Y657 262 aaPredicted RBP16.24■□□□□ 0.19
SNX1-208ENST00000559844 REM1O75628 298 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 NDUFB2O95178 105 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 PEPDP12955 493 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 CRYBB2P43320 205 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 SLC6A8P48029 635 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 RPS15P62841 145 aaKnown RBP16.23■□□□□ 0.19
SNX1-208ENST00000559844 DNASE1L3Q13609 305 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 TPBGQ13641 420 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 CD226Q15762 336 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 INAQ16352 499 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 SLC35F1Q5T1Q4 408 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 OR2G6Q5TZ20 316 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 LIPKQ5VXJ0 399 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 SHFQ7M4L6 423 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 IGFN1Q86VF2 1251 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 C17orf47Q8NEP4 570 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 OR4F15Q8NGB8 312 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 OR52N1Q8NH53 320 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 WWTR1Q9GZV5 400 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 LAT2Q9GZY6 243 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 ACACAQ13085 2346 aa16.23■□□□□ 0.19
SNX1-208ENST00000559844 APC2O95996 2303 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 FAM183AA6NL82 134 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 ELOA3DA6NLF2 546 aaPredicted RBP16.22■□□□□ 0.19
SNX1-208ENST00000559844 C21orf140B9A014 251 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 PPP1R3DO95685 299 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 RAB40ALP0C0E4 278 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 NR0B1P51843 470 aaKnown RBP16.22■□□□□ 0.19
SNX1-208ENST00000559844 ACSM1Q08AH1 577 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 ELOA3BQ3SY89 546 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 TUBA3EQ6PEY2 450 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 MFSD4AQ8N468 514 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 GATSQ8NAP1 163 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 ELOA3Q8NG57 546 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 GATAD2BQ8WXI9 593 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 KIAA1143Q96AT1 154 aaPredicted RBP16.22■□□□□ 0.19
SNX1-208ENST00000559844 ADOQ96SZ5 270 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 CDADC1Q9BWV3 514 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 PTRH2Q9Y3E5 179 aaKnown RBP16.22■□□□□ 0.19
SNX1-208ENST00000559844 FRYQ5TBA9 3013 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 A0A1W2PQD3 144 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 IDSB3KWA1 339 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 TERTO14746 1132 aaKnown RBP16.22■□□□□ 0.19
SNX1-208ENST00000559844 PRKNO60260 465 aaPredicted RBP16.22■□□□□ 0.19
SNX1-208ENST00000559844 TSPAN2O60636 221 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 KLF7O75840 302 aaPredicted RBP16.22■□□□□ 0.19
SNX1-208ENST00000559844 OR7A10O76100 309 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 CD63P08962 238 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 BMP4P12644 408 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 F8A1P23610 371 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 NOS3P29474 1203 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 RPS18P62269 152 aaKnown RBP16.22■□□□□ 0.19
SNX1-208ENST00000559844 PLCXD2Q0VAA5 305 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 ITGADQ13349 1161 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 NACC2Q96BF6 587 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 SECISBP2Q96T21 854 aaKnown RBP16.22■□□□□ 0.19
SNX1-208ENST00000559844 TMEM43Q9BTV4 400 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 CRB3Q9BUF7 120 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 ASPNQ9BXN1 380 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 GPR87Q9BY21 358 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 CCDC86Q9H6F5 360 aaKnown RBP16.22■□□□□ 0.19
SNX1-208ENST00000559844 C12orf10Q9HB07 376 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 INPP5EQ9NRR6 644 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 ERVK13-1Q9NX77 482 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 KLHL21Q9UJP4 597 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 FARSAQ9Y285 508 aaKnown RBP16.22■□□□□ 0.19
SNX1-208ENST00000559844 ZNF337Q9Y3M9 751 aa16.22■□□□□ 0.19
SNX1-208ENST00000559844 CELSR3Q9NYQ7 3312 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 ZNF670-ZNF695F2Z2N8 137 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 J3QRE1 110 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 GNB5O14775 395 aa16.21■□□□□ 0.19
SNX1-208ENST00000559844 TLX3O43711 291 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms