RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 TMEM81Q6P7N7 255 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 MEPCEQ7L2J0 689 aaKnown RBP11.52□□□□□ -0.56
USP3-213ENST00000559711 CACTIN-AS1Q8N1I8 211 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 TMEM234Q8WY98 164 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 TAAR8Q969N4 342 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 MOGAT1Q96PD6 335 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 ERMAPQ96PL5 475 aaPredicted RBP11.52□□□□□ -0.56
USP3-213ENST00000559711 MGLLQ99685 303 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 PRRX2Q99811 253 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 MND1Q9BWT6 205 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 GPR87Q9BY21 358 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 FKRPQ9H9S5 495 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 ZNF160Q9HCG1 818 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 CPNE5Q9HCH3 593 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 NRIP3Q9NQ35 241 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 SDHAF3Q9NRP4 125 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 ZNF229Q9UJW7 825 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 TMED7Q9Y3B3 224 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 KIF26BQ2KJY2 2108 aa11.52□□□□□ -0.56
USP3-213ENST00000559711 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 A0A1W2PPW3 197 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 C2orf72A6NCS6 295 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 C21orf140B9A014 251 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 PRR23D1E9PI22 279 aaPredicted RBP11.52□□□□□ -0.57
USP3-213ENST00000559711 TP53I11O14683 189 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 TERTO14746 1132 aaKnown RBP11.52□□□□□ -0.57
USP3-213ENST00000559711 FOXD2O60548 495 aaPredicted RBP11.52□□□□□ -0.57
USP3-213ENST00000559711 WISP1O95388 367 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 BGLAPP02818 100 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 PRR23D2P0DMB1 279 aaPredicted RBP11.52□□□□□ -0.57
USP3-213ENST00000559711 APEHP13798 732 aaKnown RBP11.52□□□□□ -0.57
USP3-213ENST00000559711 ZNF3P17036 446 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 UQCRC1P31930 480 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 SOX3P41225 446 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 RPS18P62269 152 aaKnown RBP11.52□□□□□ -0.57
USP3-213ENST00000559711 SNTA1Q13424 505 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 AQP6Q13520 282 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 ARMC4Q5T2S8 1044 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 BICRALQ6AI39 1079 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 OR5M10Q6IEU7 315 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 NIPAL3Q6P499 406 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 C19orf48Q6RUI8 117 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 OPN5Q6U736 354 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 RPS19BP1Q86WX3 136 aaKnown RBP11.52□□□□□ -0.57
USP3-213ENST00000559711 DND1Q8IYX4 353 aaKnown RBP11.52□□□□□ -0.57
USP3-213ENST00000559711 GALNT15Q8N3T1 639 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 LRRC75AQ8NAA5 344 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 SLC37A3Q8NCC5 494 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 STK35Q8TDR2 534 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 CFAP54Q96N23 3096 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 FRMD6Q96NE9 622 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 SECISBP2Q96T21 854 aaKnown RBP11.52□□□□□ -0.57
USP3-213ENST00000559711 JAM3Q9BX67 310 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 KLRF1Q9NZS2 232 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 MED11Q9P086 117 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 KLHL21Q9UJP4 597 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 EXOSC1Q9Y3B2 195 aaKnown RBP11.52□□□□□ -0.57
USP3-213ENST00000559711 IER3IP1Q9Y5U9 82 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 WIF1Q9Y5W5 379 aa11.52□□□□□ -0.57
USP3-213ENST00000559711 CHCHD2Q9Y6H1 151 aaPredicted RBP11.52□□□□□ -0.57
USP3-213ENST00000559711 RALGAPA1Q6GYQ0 2036 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 TMEM129A0AVI4 362 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 TMEM72A0PK05 275 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 A8MVM7 634 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 J3QRE1 110 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 SLC22A1O15245 554 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 AHCYL1O43865 530 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 SUSD5O60279 629 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 HPP00738 406 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 MT-ATP6P00846 226 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 PRKCAP17252 672 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 MYL12AP19105 171 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 SLC2A5P22732 501 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 NOS3P29474 1203 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 RGS6P49758 472 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 ETV1P50549 477 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 MLF1P58340 268 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 CHAF1BQ13112 559 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 DOC2BQ14184 412 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 CRMP1Q14194 572 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 SPHARQ15513 63 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 MED22Q15528 200 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 SLC25A53Q5H9E4 307 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 C5orf46Q6UWT4 87 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 C10orf53Q8N6V4 93 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 MOSPD2Q8NHP6 518 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 NTNG2Q96CW9 530 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 DDOQ99489 341 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 PTDSS2Q9BVG9 487 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 HCAR1Q9BXC0 346 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 METTL7AQ9H8H3 244 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 MED20Q9H944 212 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 PPP4R1LQ9P1A2 415 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 SLC6A5Q9Y345 797 aa11.51□□□□□ -0.57
USP3-213ENST00000559711 WDFY3Q8IZQ1 3526 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 ZC3H12DA2A288 527 aaKnown RBP11.5□□□□□ -0.57
USP3-213ENST00000559711 CCDC182A6NF36 153 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 SLC22A31A6NKX4 558 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 BLOC1S5-TXNDC5H3BN57 136 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 IMPA2O14732 288 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms