RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ATP6V1G2-DDX39BF2Z307 99 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 ITM2AO43736 263 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 CPSF4O95639 269 aaKnown RBP11.45□□□□□ -0.58
TPM1-220ENST00000559556 USF1P22415 310 aaPredicted RBP11.45□□□□□ -0.58
TPM1-220ENST00000559556 MPGP29372 298 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 CHI3L1P36222 383 aaPredicted RBP11.45□□□□□ -0.58
TPM1-220ENST00000559556 SWI5Q1ZZU3 235 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 SPANXN4Q5MJ08 99 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 C9orf135Q5VTT2 229 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 CYB5R2Q6BCY4 276 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 HMGN2P46Q86SG4 172 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 LRRC34Q8IZ02 419 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 ZNF781Q8N8C0 355 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 VPS37AQ8NEZ2 397 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 PPP1R36Q96LQ0 422 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 TRNT1Q96Q11 434 aaKnown RBP11.45□□□□□ -0.58
TPM1-220ENST00000559556 SLC35A5Q9BS91 424 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 NAA11Q9BSU3 229 aaPredicted RBP11.45□□□□□ -0.58
TPM1-220ENST00000559556 C1QTNF6Q9BXI9 259 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 BEX2Q9BXY8 128 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 ROPN1BQ9BZX4 212 aaPredicted RBP11.45□□□□□ -0.58
TPM1-220ENST00000559556 SHARPINQ9H0F6 387 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 ROPN1Q9HAT0 212 aaPredicted RBP11.45□□□□□ -0.58
TPM1-220ENST00000559556 ATP23Q9Y6H3 246 aa11.45□□□□□ -0.58
TPM1-220ENST00000559556 TMEM72A0PK05 275 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 ZC3H12DA2A288 527 aaKnown RBP11.44□□□□□ -0.58
TPM1-220ENST00000559556 AGAP5A6NIR3 686 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 VWC2LB2RUY7 222 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 LY6HO94772 140 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 C1QCP02747 245 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 CHRM4P08173 479 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 CCNA2P20248 432 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 IGFBP5P24593 272 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 SLC1A3P43003 542 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 GZMKP49863 264 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 CLNS1AP54105 237 aaKnown RBP11.44□□□□□ -0.58
TPM1-220ENST00000559556 LSM11P83369 360 aaKnown RBP eCLIP11.44□□□□□ -0.58
TPM1-220ENST00000559556 IFFO1Q0D2I5 559 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 KRTAP24-1Q3LI83 254 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 LSRQ86X29 649 aaPredicted RBP11.44□□□□□ -0.58
TPM1-220ENST00000559556 NUDCD3Q8IVD9 361 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 POMGNT2Q8NAT1 580 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 WDR60Q8WVS4 1066 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 PKNOX2Q96KN3 472 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 CCDC115Q96NT0 180 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 PIF1Q9H611 641 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 BTNL2Q9UIR0 455 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 RAP2CQ9Y3L5 183 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 FKBP7Q9Y680 259 aa11.44□□□□□ -0.58
TPM1-220ENST00000559556 LIPT2A6NK58 231 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 AQP7P3A6NL99 342 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 E9PBE3 544 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 NDUFS8O00217 210 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 LMX1BO60663 402 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 SNUPNO95149 360 aaKnown RBP11.43□□□□□ -0.58
TPM1-220ENST00000559556 WNT11O96014 354 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 SERPINE1P05121 402 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 MYZAPP0CAP1 466 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 TACR3P29371 465 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 PDLIM4P50479 330 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 PRPS1P60891 318 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 ABCE1P61221 599 aaKnown RBP11.43□□□□□ -0.58
TPM1-220ENST00000559556 TXNL4AP83876 142 aaKnown RBP11.43□□□□□ -0.58
TPM1-220ENST00000559556 EPS8Q12929 822 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 SYPL1Q16563 259 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 MST1LQ2TV78 715 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 FAM174BQ3ZCQ3 159 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 OTUD3Q5T2D3 398 aaPredicted RBP11.43□□□□□ -0.58
TPM1-220ENST00000559556 MRPL2Q5T653 305 aaKnown RBP11.43□□□□□ -0.58
TPM1-220ENST00000559556 KLHL24Q6TFL4 600 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 LRRC74BQ6ZQY2 392 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 RNF130Q86XS8 419 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 ANKFN1Q8N957 763 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 ZIC4Q8N9L1 334 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 OR9K2Q8NGE7 335 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 SORCS2Q96PQ0 1159 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 PIMREGQ9BSJ6 248 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 SF3B5Q9BWJ5 86 aaKnown RBP11.43□□□□□ -0.58
TPM1-220ENST00000559556 ADAM19Q9H013 955 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 OBP2BQ9NPH6 170 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 HAO1Q9UJM8 370 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 PRDM4Q9UKN5 801 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 MOKQ9UQ07 419 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.43□□□□□ -0.58
TPM1-220ENST00000559556 ARHGAP32A7KAX9 2087 aa11.43□□□□□ -0.58
TPM1-220ENST00000559556 MGAM2Q2M2H8 2515 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 CFAP73A6NFT4 308 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 BIRC5O15392 142 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 GPIP06744 558 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 UQCRBP14927 111 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 SRD5A1P18405 259 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 NR4A2P43354 598 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 ANXA11P50995 505 aaKnown RBP11.42□□□□□ -0.58
TPM1-220ENST00000559556 GNA13Q14344 377 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 CHI3L2Q15782 390 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 HIKESHIQ53FT3 197 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 FAM166AQ6J272 317 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 OGFOD2Q6N063 350 aa11.42□□□□□ -0.58
TPM1-220ENST00000559556 ABHD12BQ7Z5M8 362 aaPredicted RBP11.42□□□□□ -0.58
TPM1-220ENST00000559556 ZNF440Q8IYI8 595 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms