RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 ADRM1Q16186 407 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 VMACQ2NL98 169 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 BEX5Q5H9J7 111 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 ALG10BQ5I7T1 473 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 OTUD3Q5T2D3 398 aaPredicted RBP3.89□□□□□ -1.79
SNX1-205ENST00000559339 SFRP5Q5T4F7 317 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 FAM69AQ5T7M9 428 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 C1orf140Q5VVS0 124 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 FBXW9Q5XUX1 488 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 FAM91A1Q658Y4 838 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 OR7E24Q6IFN5 339 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 NANOGP8Q6NSW7 305 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 ERICH5Q6P6B1 374 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 DHRS4L2Q6PKH6 230 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 BRICD5Q6PL45 260 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 PAQR6Q6TCH4 344 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 TFAP2EQ6VUC0 442 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 STAC2Q6ZMT1 411 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 SPATA21Q7Z572 469 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 ABHD12BQ7Z5M8 362 aaPredicted RBP3.89□□□□□ -1.79
SNX1-205ENST00000559339 NET1Q7Z628 596 aaPredicted RBP3.89□□□□□ -1.79
SNX1-205ENST00000559339 ARPINQ7Z6K5 226 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 PATL1Q86TB9 770 aaKnown RBP3.89□□□□□ -1.79
SNX1-205ENST00000559339 CDH24Q86UP0 819 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 P2RY8Q86VZ1 359 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 SNX32Q86XE0 403 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 MSRB3Q8IXL7 192 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 LSMEM1Q8N8F7 131 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 SMYD1Q8NB12 490 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 STK35Q8TDR2 534 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 HSD17B8Q92506 261 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 PROX1Q92786 737 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 APH1AQ96BI3 265 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 ZNF524Q96C55 264 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 LRRC58Q96CX6 371 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 MUCL1Q96DR8 90 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 CMTM5Q96DZ9 223 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 DNAJA3Q96EY1 480 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 SLC47A1Q96FL8 570 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 ZC3HAV1LQ96H79 300 aaKnown RBP3.89□□□□□ -1.79
SNX1-205ENST00000559339 ARL5BQ96KC2 179 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 WFIKKN1Q96NZ8 548 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 ZNF317Q96PQ6 595 aaPredicted RBP3.89□□□□□ -1.79
SNX1-205ENST00000559339 EPYCQ99645 322 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 CPPED1Q9BRF8 314 aaPredicted RBP3.89□□□□□ -1.79
SNX1-205ENST00000559339 SF3B5Q9BWJ5 86 aaKnown RBP3.89□□□□□ -1.79
SNX1-205ENST00000559339 TRIM2Q9C040 744 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 OR11A1Q9GZK7 315 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 ACTR6Q9GZN1 396 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 FAM107BQ9H098 131 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 PIF1Q9H611 641 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 ZNF385DQ9H6B1 395 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 ESRP2Q9H6T0 727 aaKnown RBP3.89□□□□□ -1.79
SNX1-205ENST00000559339 NANOGQ9H9S0 305 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 EFCAB1Q9HAE3 211 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 C12orf10Q9HB07 376 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 ASB6Q9NWX5 421 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 ADPRHL2Q9NX46 363 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 UPB1Q9UBR1 384 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 TESQ9UGI8 421 aaKnown RBP3.89□□□□□ -1.79
SNX1-205ENST00000559339 ITGB1BP2Q9UKP3 347 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 BAG5Q9UL15 447 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 SLC9A8Q9Y2E8 581 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 TESMINQ9Y4I5 508 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 MYO9AB2RTY4 2548 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 NCKAP5O14513 1909 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 TEX15Q9BXT5 2789 aa3.89□□□□□ -1.79
SNX1-205ENST00000559339 CSMD1Q96PZ7 3565 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 SPG11Q96JI7 2443 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 CIB4A0PJX0 185 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 ZC3H12DA2A288 527 aaKnown RBP3.88□□□□□ -1.79
SNX1-205ENST00000559339 GMNCA6NCL1 334 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 LIPT2A6NK58 231 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 M0QX08 132 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 FBP2O00757 339 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 AIM2O14862 343 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 FRS3O43559 492 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 FMO6PO60774 539 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 GMNNO75496 209 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 MFN2O95140 757 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 AKR7A3O95154 331 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 LGI1O95970 557 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 RAF1P04049 648 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 HRGP04196 525 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 PRG2P13727 222 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 NQO1P15559 274 aaKnown RBP3.88□□□□□ -1.79
SNX1-205ENST00000559339 CD1EP15812 388 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 ZNF43P17038 809 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 GGT1P19440 569 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 CD247P20963 164 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 CRYGSP22914 178 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 DNAJA1P31689 397 aaKnown RBP3.88□□□□□ -1.79
SNX1-205ENST00000559339 LSP1P33241 339 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 PCGF2P35227 344 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 RPS5P46782 204 aaKnown RBP3.88□□□□□ -1.79
SNX1-205ENST00000559339 OR3A2P47893 321 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 SLC16A1P53985 500 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 PCBP3P57721 371 aaKnown RBP3.88□□□□□ -1.79
SNX1-205ENST00000559339 KRTAP10-9P60411 292 aa3.88□□□□□ -1.79
SNX1-205ENST00000559339 HOXC5Q00444 222 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms