RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 LIPT2A6NK58 231 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 ELOA3DA6NLF2 546 aaPredicted RBP16.64■□□□□ 0.25
CASC4-209ENST00000559222 ZNF716A6NP11 495 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 A8MVM7 634 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 CXCR6O00574 342 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 MSTNO14793 375 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 HNRNPRO43390 633 aaKnown RBP16.64■□□□□ 0.25
CASC4-209ENST00000559222 C8BP07358 591 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 FUT4P22083 530 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 IDUAP35475 653 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 OR1E2P47887 323 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 CLK1P49759 484 aaKnown RBP16.64■□□□□ 0.25
CASC4-209ENST00000559222 CDH12P55289 794 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 NCALDP61601 193 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 CSNK2A1P68400 391 aaPredicted RBP16.64■□□□□ 0.25
CASC4-209ENST00000559222 FAM27E3Q08E93 113 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 RASGEF1BQ0VAM2 473 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 OR7A5Q15622 319 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 ELOA3BQ3SY89 546 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 ALG10BQ5I7T1 473 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 ENTPD8Q5MY95 495 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 C1orf140Q5VVS0 124 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 CARM1Q86X55 608 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 RBM15BQ8NDT2 890 aaKnown RBP16.64■□□□□ 0.25
CASC4-209ENST00000559222 BHLHE22Q8NFJ8 381 aaPredicted RBP16.64■□□□□ 0.25
CASC4-209ENST00000559222 ELOA3Q8NG57 546 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 OR6K3Q8NGY3 331 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 TRIM2Q9C040 744 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 PROCRQ9UNN8 238 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 EMC9Q9Y3B6 208 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 CACNA1DQ01668 2161 aa16.64■□□□□ 0.25
CASC4-209ENST00000559222 PRKD3O94806 890 aa16.63■□□□□ 0.25
CASC4-209ENST00000559222 AKR7A3O95154 331 aa16.63■□□□□ 0.25
CASC4-209ENST00000559222 CD8BP10966 210 aa16.63■□□□□ 0.25
CASC4-209ENST00000559222 NTF4P34130 210 aa16.63■□□□□ 0.25
CASC4-209ENST00000559222 RPS5P46782 204 aaKnown RBP16.63■□□□□ 0.25
CASC4-209ENST00000559222 H3F3AP84243 136 aa16.63■□□□□ 0.25
CASC4-209ENST00000559222 RNPS1Q15287 305 aaKnown RBP16.63■□□□□ 0.25
CASC4-209ENST00000559222 EXOC3L2Q2M3D2 409 aa16.63■□□□□ 0.25
CASC4-209ENST00000559222 VTCN1Q7Z7D3 282 aa16.63■□□□□ 0.25
CASC4-209ENST00000559222 RANBP3LQ86VV4 465 aaPredicted RBP16.63■□□□□ 0.25
CASC4-209ENST00000559222 TMEM99Q8N816 258 aa16.63■□□□□ 0.25
CASC4-209ENST00000559222 LINC01560Q8TB33 94 aa16.63■□□□□ 0.25
CASC4-209ENST00000559222 RNF217Q8TC41 542 aa16.63■□□□□ 0.25
CASC4-209ENST00000559222 KCTD14Q9BQ13 255 aaPredicted RBP16.63■□□□□ 0.25
CASC4-209ENST00000559222 POTEKPQ9BYX7 375 aa16.63■□□□□ 0.25
CASC4-209ENST00000559222 BCO1Q9HAY6 547 aa16.63■□□□□ 0.25
CASC4-209ENST00000559222 ADA2Q9NZK5 511 aa16.63■□□□□ 0.25
CASC4-209ENST00000559222 EGFL7Q9UHF1 273 aa16.63■□□□□ 0.25
CASC4-209ENST00000559222 SH3GLB1Q9Y371 365 aa16.63■□□□□ 0.25
CASC4-209ENST00000559222 FTCDNL1E5RQL4 147 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 T-ENOLP0DO92 83 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 CBLP22681 906 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 MSX2P35548 267 aaPredicted RBP16.62■□□□□ 0.25
CASC4-209ENST00000559222 P2RY4P51582 365 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 KRT72Q14CN4 511 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 TFAP2EQ6VUC0 442 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 SLC38A4Q969I6 547 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 TAAR8Q969N4 342 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 TPD52L3Q96J77 140 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 TMEM27Q9HBJ8 222 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 SPAG4Q9NPE6 437 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 PLSCR4Q9NRQ2 329 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 GLRX2Q9NS18 164 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 ADPRHL2Q9NX46 363 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 CRIM1Q9NZV1 1036 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 KLHL9Q9P2J3 617 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 PRSS50Q9UI38 385 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 TRAPPC4Q9Y296 219 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 AP3M1Q9Y2T2 418 aa16.62■□□□□ 0.25
CASC4-209ENST00000559222 A0A087WUJ7 227 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 LRRN3E7EW58 273 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 NDUFAB1O14561 156 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 FMO6PO60774 539 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 YES1P07947 543 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 GGT1P19440 569 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 TCN1P20061 433 aaPredicted RBP16.61■□□□□ 0.25
CASC4-209ENST00000559222 SLC35A1P78382 337 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 LTBQ06643 244 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 TMEM201Q5SNT2 666 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 OTUD3Q5T2D3 398 aaPredicted RBP16.61■□□□□ 0.25
CASC4-209ENST00000559222 ULK3Q6PHR2 472 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 DEF8Q6ZN54 512 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 PGAM4Q8N0Y7 254 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 SLC43A2Q8N370 569 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 BCAS4Q8TDM0 211 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 STK35Q8TDR2 534 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 ADAMTS16Q8TE57 1224 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 DNAJA4Q8WW22 397 aaPredicted RBP16.61■□□□□ 0.25
CASC4-209ENST00000559222 PROX1Q92786 737 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 SLC25A36Q96CQ1 311 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 C12orf10Q9HB07 376 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 SLC7A7Q9UM01 511 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 SNX13Q9Y5W8 968 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 DCHS2Q6V1P9 2916 aa16.61■□□□□ 0.25
CASC4-209ENST00000559222 IGKV3D-15A0A087WSY6 115 aa16.6■□□□□ 0.25
CASC4-209ENST00000559222 GSTA4O15217 222 aa16.6■□□□□ 0.25
CASC4-209ENST00000559222 DNPH1O43598 174 aa16.6■□□□□ 0.25
CASC4-209ENST00000559222 AHSA1O95433 338 aa16.6■□□□□ 0.25
CASC4-209ENST00000559222 SERPINA1P01009 418 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms