RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ARL5BQ96KC2 179 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 UCK2Q9BZX2 261 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 SLC6A15Q9H2J7 730 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 PAPOLBQ9NRJ5 636 aaKnown RBP16.29■□□□□ 0.2
CLPX-203ENST00000558958 POFUT2Q9Y2G5 429 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 MED12Q93074 2177 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 CH25HO95992 272 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 TFPIP10646 304 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 GSTM3P21266 225 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 SHC1P29353 583 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 RPS5P46782 204 aaKnown RBP16.29■□□□□ 0.2
CLPX-203ENST00000558958 AQP4P55087 323 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 ZNF74Q16587 644 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 TMEM176BQ3YBM2 270 aaPredicted RBP16.29■□□□□ 0.2
CLPX-203ENST00000558958 CMPK2Q5EBM0 449 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 IZUMO2Q6UXV1 221 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 SLC46A3Q7Z3Q1 461 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 GALNT5Q7Z7M9 940 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 PARP8Q8N3A8 854 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 OR6S1Q8NH40 331 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 LIPHQ8WWY8 451 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 MOGAT1Q96PD6 335 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 DEFB127Q9H1M4 99 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 SLC6A5Q9Y345 797 aa16.29■□□□□ 0.2
CLPX-203ENST00000558958 MPDZO75970 2070 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 MAP1BP46821 2468 aaKnown RBP16.28■□□□□ 0.2
CLPX-203ENST00000558958 EFCAB9A8MZ26 197 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 LRRN3E7EW58 273 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 OR2T1O43869 369 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 OR7A10O76100 309 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 AHSA1O95433 338 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 BGLAPP02818 100 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 OPN1LWP04000 364 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 SAGP10523 405 aaPredicted RBP16.28■□□□□ 0.2
CLPX-203ENST00000558958 SFTPDP35247 375 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 RAD23AP54725 363 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 ALDH6A1Q02252 535 aaKnown RBP16.28■□□□□ 0.2
CLPX-203ENST00000558958 LTBQ06643 244 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 RFX4Q33E94 735 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 FAM69AQ5T7M9 428 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 SIAH3Q8IW03 269 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 Q8NA96 180 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 RELTQ969Z4 430 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 RDH12Q96NR8 316 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 CNTNAP3BQ96NU0 1288 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 TACO1Q9BSH4 297 aaKnown RBP16.28■□□□□ 0.2
CLPX-203ENST00000558958 CNTNAP3Q9BZ76 1288 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 SMPD3Q9NY59 655 aaPredicted RBP16.28■□□□□ 0.2
CLPX-203ENST00000558958 LUZP4Q9P127 313 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 REV1Q9UBZ9 1251 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 HDGFL3Q9Y3E1 203 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 ORC6Q9Y5N6 252 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 LIPGQ9Y5X9 500 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 AP4B1Q9Y6B7 739 aa16.28■□□□□ 0.2
CLPX-203ENST00000558958 PRRC2CQ9Y520 2896 aaKnown RBP16.27■□□□□ 0.19
CLPX-203ENST00000558958 UNC119BA6NIH7 251 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 FTCDNL1E5RQL4 147 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 SNAP29O95721 258 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 IGHG3P01860 377 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 IMPDH2P12268 514 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 FUT1P19526 365 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 IDUAP35475 653 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 IL1RL1Q01638 556 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 MYBPHQ13203 477 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 RASSF6Q6ZTQ3 369 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 TRILQ7L0X0 811 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 C10orf53Q8N6V4 93 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 LRRC17Q8N6Y2 441 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 MFSD8Q8NHS3 518 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 NEIL3Q8TAT5 605 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 DNAJA3Q96EY1 480 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 OR5B2Q96R09 309 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 FKRPQ9H9S5 495 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 NANSQ9NR45 359 aa16.27■□□□□ 0.19
CLPX-203ENST00000558958 TRGV5A0A0B4J1U4 118 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 LIPT2A6NK58 231 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 GJE1A6NN92 205 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 HCN1O60741 890 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 MT-ATP6P00846 226 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 TP53P04637 393 aaPredicted RBP16.26■□□□□ 0.19
CLPX-203ENST00000558958 ASAH2BP0C7U1 165 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 OSMP13725 252 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 POU3F2P20265 443 aaPredicted RBP16.26■□□□□ 0.19
CLPX-203ENST00000558958 SLC9A3P48764 834 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 STARP49675 285 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 C19orf57Q0VDD7 668 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 ZIK1Q3SY52 487 aaPredicted RBP16.26■□□□□ 0.19
CLPX-203ENST00000558958 NHSL2Q5HYW2 709 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 OAFQ86UD1 273 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 OR13C2Q8NGS9 318 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 SMPDL3BQ92485 455 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 SLC25A36Q96CQ1 311 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 KLHL15Q96M94 604 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 GABARAPL3Q9BY60 117 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 SLC25A18Q9H1K4 315 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 TSPAN10Q9H1Z9 355 aaPredicted RBP16.26■□□□□ 0.19
CLPX-203ENST00000558958 TOR3AQ9H497 397 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 LDAHQ9H6V9 325 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 ZNF229Q9UJW7 825 aa16.26■□□□□ 0.19
CLPX-203ENST00000558958 TLN1Q9Y490 2541 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms