RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	EBF4	Q9BQW3	602 aa		6.2	□□□□□ -1.42
MARK3-215	ENST00000558787	TMEM204	Q9BSN7	226 aa		6.2	□□□□□ -1.42
MARK3-215	ENST00000558787	THUMPD3	Q9BV44	507 aa	Known RBP	6.2	□□□□□ -1.42
MARK3-215	ENST00000558787	HOXD1	Q9GZZ0	328 aa		6.2	□□□□□ -1.42
MARK3-215	ENST00000558787	RABEP2	Q9H5N1	569 aa		6.2	□□□□□ -1.42
MARK3-215	ENST00000558787	WDR55	Q9H6Y2	383 aa	Predicted RBP	6.2	□□□□□ -1.42
MARK3-215	ENST00000558787	TIGAR	Q9NQ88	270 aa		6.2	□□□□□ -1.42
MARK3-215	ENST00000558787	GLRX2	Q9NS18	164 aa		6.2	□□□□□ -1.42
MARK3-215	ENST00000558787	ATAD3A	Q9NVI7	634 aa		6.2	□□□□□ -1.42
MARK3-215	ENST00000558787	PAQR5	Q9NXK6	330 aa	Predicted RBP	6.2	□□□□□ -1.42
MARK3-215	ENST00000558787	ASIC5	Q9NY37	505 aa		6.2	□□□□□ -1.42
MARK3-215	ENST00000558787	PRSS50	Q9UI38	385 aa		6.2	□□□□□ -1.42
MARK3-215	ENST00000558787	GPR160	Q9UJ42	338 aa		6.2	□□□□□ -1.42
MARK3-215	ENST00000558787	ING1	Q9UK53	422 aa	Predicted RBP	6.2	□□□□□ -1.42
MARK3-215	ENST00000558787	GPR52	Q9Y2T5	361 aa		6.2	□□□□□ -1.42
MARK3-215	ENST00000558787	DNHD1	Q96M86	4753 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	HIVEP2	P31629	2446 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	ATR	Q13535	2644 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	CLDN24	A6NM45	220 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	KRTAP9-7	A8MTY7	169 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787		E9PBE3	544 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	HS3ST1	O14792	307 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	UBD	O15205	165 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	SLC22A2	O15244	555 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	ZNF264	O43296	627 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	EIF4E2	O60573	245 aa	Known RBP	6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	SCN2B	O60939	215 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	UGT2B17	O75795	530 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	LYZL6	O75951	148 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	CNOT4	O95628	575 aa	Known RBP	6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	CSTA	P01040	98 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	IGHV3-9	P01782	118 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	HEXA	P06865	529 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	YES1	P07947	543 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	OR12D1	P0DN82	309 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	IDO1	P14902	403 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	DDX5	P17844	614 aa	Known RBP	6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	CCNA2	P20248	432 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	PSMB1	P20618	241 aa	Known RBP	6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	IL32	P24001	234 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	SLC7A1	P30825	629 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	RYK	P34925	604 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	MRPL19	P49406	292 aa	Known RBP	6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	ATP4B	P51164	291 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	SESN3	P58005	492 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	STX1B	P61266	288 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	TEK	Q02763	1124 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	MERTK	Q12866	999 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	SKP2	Q13309	424 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	RNPS1	Q15287	305 aa	Known RBP	6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	TAB1	Q15750	504 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	GTF2IRD2B	Q6EKJ0	949 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	PRSS57	Q6UWY2	283 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	TFAP2E	Q6VUC0	442 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	GTF2IRD2	Q86UP8	949 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	PRIMA1	Q86XR5	153 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	MAPK1IP1L	Q8NDC0	245 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	TOR1AIP2	Q8NFQ8	470 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	ZFP90	Q8TF47	636 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	TMEM171	Q8WVE6	324 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	XAGE5	Q8WWM1	108 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	CPNE4	Q96A23	557 aa	Predicted RBP	6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	SLC35G5	Q96KT7	338 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	LRRC37B	Q96QE4	947 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	OR52B2	Q96RD2	323 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	OR51I1	Q9H343	314 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	HHATL	Q9HCP6	504 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	TMEM45A	Q9NWC5	275 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	KLHL13	Q9P2N7	655 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	LAMP3	Q9UQV4	416 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	COL6A5	A8TX70	2615 aa		6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	RAI1	Q7Z5J4	1906 aa	Predicted RBP	6.19	□□□□□ -1.42
MARK3-215	ENST00000558787	ALPK2	Q86TB3	2170 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	DPRX	A6NFQ7	191 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	GJE1	A6NN92	205 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	INAFM1	C9JVW0	142 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	ANKRD28	O15084	1053 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	SMAD9	O15198	467 aa	Known RBP	6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	RAMP1	O60894	148 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	STX11	O75558	287 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	FES	P07332	822 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	SOD3	P08294	240 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	KRT16	P08779	473 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	ALDOC	P09972	364 aa	Known RBP	6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	PABPC4L	P0CB38	370 aa	Known RBP	6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	TFPI	P10646	304 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	NCF2	P19878	526 aa	Predicted RBP	6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	ELK4	P28324	431 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	CDKN1A	P38936	164 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	SUMO3	P55854	103 aa	Predicted RBP	6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	ATP5J2	P56134	94 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	C21orf58	P58505	322 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	RAC3	P60763	192 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	BSPH1	Q075Z2	132 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	RASGEF1B	Q0VAM2	473 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	FUT5	Q11128	374 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	SF3A3	Q12874	501 aa	Known RBP eCLIP	6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	FAP	Q12884	760 aa		6.18	□□□□□ -1.42
MARK3-215	ENST00000558787	SELENBP1	Q13228	472 aa		6.18	□□□□□ -1.42

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