RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 INPP5KQ9BT40 448 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 HDHD5Q9BXW7 423 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 FBXO34Q9NWN3 711 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 CRNNQ9UBG3 495 aaPredicted RBP7.78□□□□□ -1.16
USP3-208ENST00000558285 RPS6KB2Q9UBS0 482 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 ANGPT4Q9Y264 503 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 AP3M1Q9Y2T2 418 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 HDGFL3Q9Y3E1 203 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 NPIPA5A0A0B4J1W7 369 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 TRIM64BA6NI03 449 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 BBIP1A8MTZ0 92 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 NPIPA7E9PJI5 369 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 GPR171O14626 319 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 TNFSF11O14788 317 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 CXCL13O43927 109 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 FCMRO60667 390 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 EIF1BO60739 113 aaKnown RBP7.78□□□□□ -1.16
USP3-208ENST00000558285 NPPAP01160 153 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 BCHEP06276 602 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 NPIPA8P0DM63 369 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 EPXP11678 715 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 POU2F1P14859 743 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 ENPP1P22413 925 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 SLC6A2P23975 617 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 CXCR1P25024 350 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 ADSLP30566 484 aaPredicted RBP7.78□□□□□ -1.16
USP3-208ENST00000558285 CD79BP40259 229 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 POLR2HP52434 150 aaKnown RBP7.78□□□□□ -1.16
USP3-208ENST00000558285 CLDN20P56880 219 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 RAC3P60763 192 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 PHC1P78364 1004 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 MYBPC1Q00872 1141 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 CHRNEQ04844 493 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.78□□□□□ -1.16
USP3-208ENST00000558285 INTS11Q5TA45 600 aaKnown RBP7.78□□□□□ -1.16
USP3-208ENST00000558285 HIST2H2BCQ6DN03 193 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 FRRS1Q6ZNA5 592 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 SEM1Q6ZVN7 128 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 ZAR1Q86SH2 424 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 LUZP2Q86TE4 346 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 CLEC4FQ8N1N0 589 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 PQLC1Q8N2U9 271 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 TSPAN14Q8NG11 270 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 OR5M1Q8NGP8 315 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 OR52P1PQ8NH57 321 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 FNDC9Q8TBE3 224 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 PNPT1Q8TCS8 783 aaKnown RBP7.78□□□□□ -1.16
USP3-208ENST00000558285 ADAMTS16Q8TE57 1224 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 RASSF5Q8WWW0 418 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 VPS33AQ96AX1 596 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 TEX37Q96LM6 180 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 DOK1Q99704 481 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 TRIM8Q9BZR9 551 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 A4GALTQ9NPC4 353 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 CHRNA9Q9UGM1 479 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 KCNE3Q9Y6H6 103 aa7.78□□□□□ -1.16
USP3-208ENST00000558285 A8MXE2 369 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 C16orf97H3BN30 126 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 C19orf84I3L1E1 186 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 SULT2B1O00204 365 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 ETV2O00321 342 aaPredicted RBP7.77□□□□□ -1.17
USP3-208ENST00000558285 SLC22A2O15244 555 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 ZNF208O43345 1280 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 SS18L1O75177 396 aaPredicted RBP7.77□□□□□ -1.17
USP3-208ENST00000558285 IFNA14P01570 189 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 INHBBP09529 407 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 IL11P20809 199 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 GTF2E2P29084 291 aaKnown RBP7.77□□□□□ -1.17
USP3-208ENST00000558285 IL12AP29459 219 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 RYKP34925 604 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 SLC1A3P43003 542 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 SUCLG1P53597 346 aaKnown RBP7.77□□□□□ -1.17
USP3-208ENST00000558285 SIRPAP78324 504 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 SLC35A1P78382 337 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 RBBP4Q09028 425 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 RGNQ15493 299 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 CYP51A1Q16850 503 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 ZBED5Q49AG3 693 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 KCTD21Q4G0X4 260 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 SYT14P1Q58G82 188 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 LRIF1Q5T3J3 769 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 WBP2NLQ6ICG8 309 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 REEP3Q6NUK4 255 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 CBLN3Q6UW01 205 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 C5orf46Q6UWT4 87 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 FCRLAQ7L513 359 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 MAVSQ7Z434 540 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 GGNQ86UU5 652 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 LIX1LQ8IVB5 337 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 ANKFN1Q8N957 763 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 RELL2Q8NC24 303 aaPredicted RBP7.77□□□□□ -1.17
USP3-208ENST00000558285 NAXEQ8NCW5 288 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 FAM71CQ8NEG0 241 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 ATP6V1C2Q8NEY4 427 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 PIGXQ8TBF5 258 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 GTF2H4Q92759 462 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 LURAP1Q96LR2 239 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 OR5B2Q96R09 309 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 MED18Q9BUE0 208 aa7.77□□□□□ -1.17
USP3-208ENST00000558285 CCDC106Q9BWC9 280 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms