RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 PRR4Q16378 134 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 CYP51A1Q16850 503 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 FAM83EQ2M2I3 478 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 KLHL40Q2TBA0 621 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 ZNF829Q3KNS6 432 aaPredicted RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 ZNF528Q3MIS6 628 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 NKAIN1Q4KMZ8 207 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 BEX5Q5H9J7 111 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 CLVS2Q5SYC1 327 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 CARD17Q5XLA6 110 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 SPECC1LQ69YQ0 1117 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 DMKNQ6E0U4 476 aaPredicted RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 THOC7Q6I9Y2 204 aaKnown RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 TWF2Q6IBS0 349 aaKnown RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 SCYL2Q6P3W7 929 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 BLOC1S2Q6QNY1 142 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 IGFL3Q6UXB1 125 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 FRA10AC1Q70Z53 315 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 TRMT10CQ7L0Y3 403 aaKnown RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 TRPM8Q7Z2W7 1104 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 ERASQ7Z444 233 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 HSD17B13Q7Z5P4 300 aaPredicted RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 STX12Q86Y82 276 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 MKXQ8IYA7 352 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 ZNF397Q8NF99 534 aaPredicted RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 OR56B1Q8NGI3 324 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 WDR36Q8NI36 951 aaKnown RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 PHOSPHO2Q8TCD6 241 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 ADAMTS16Q8TE57 1224 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 RNF138Q8WVD3 245 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 OPTNQ96CV9 577 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 ZBED3Q96IU2 234 aaPredicted RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 SELENOSQ9BQE4 189 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 EBF4Q9BQW3 602 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 NICN1Q9BSH3 213 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 NDUFAF3Q9BU61 184 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 NUP58Q9BVL2 599 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 UPF3BQ9BZI7 483 aaKnown RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 PKIBQ9C010 78 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 MFFQ9GZY8 342 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 MYOZ2Q9NPC6 264 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 IL26Q9NPH9 171 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 PNO1Q9NRX1 252 aaKnown RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 KLHL28Q9NXS3 571 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 PDP1Q9P0J1 537 aaPredicted RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 CTSFQ9UBX1 484 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 TRIM10Q9UDY6 481 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 BCAP29Q9UHQ4 241 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 STAP1Q9ULZ2 295 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 MRPS7Q9Y2R9 242 aaKnown RBP2.23□□□□□ -2.05
SPG11-206ENST00000558093 USP16Q9Y5T5 823 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 USP6P35125 1406 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 NCAPD2Q15021 1401 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 ADCY9O60503 1353 aa2.23□□□□□ -2.05
SPG11-206ENST00000558093 PRDM2Q13029 1718 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 DCAF1Q9Y4B6 1507 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 RAD50Q92878 1312 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 FANCIQ9NVI1 1328 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 ARHGAP23Q9P227 1491 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 A0A1B0GUA9 196 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 GOLGA8JA6NMD2 632 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 GABRR3A8MPY1 467 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 E9PLD3 99 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 GOLGA8TH3BQL2 631 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 SCAMP2O15127 329 aaKnown RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 RAD51BO15315 384 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 ZNF208O43345 1280 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 MMP23AO75900 390 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 CDK14O94921 469 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 MBP02144 154 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 APOA1P02647 267 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 SLC35G4P0C7Q5 338 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 GOLGA8HP0CJ92 632 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 STAG3L2P0CL84 134 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 ZNF17P17021 662 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 SRMP19623 302 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 TCN1P20061 433 aaPredicted RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 GABRR1P24046 479 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 OTX2P32243 289 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 RPL4P36578 427 aaKnown RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 DLSTP36957 453 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 RBMXP38159 391 aaKnown RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 RPS5P46782 204 aaKnown RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 NUMBP49757 651 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 GDI2P50395 445 aaKnown RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 BCAP31P51572 246 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 YWHAEP62258 255 aaKnown RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 POLR2GP62487 172 aaKnown RBP eCLIP2.22□□□□□ -2.05
SPG11-206ENST00000558093 HERVK_113P63132 956 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 ERVK-8P63133 956 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 ZNF45Q02386 682 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 BST1Q10588 318 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 HNRNPA1L2Q32P51 320 aaKnown RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 ACSF3Q4G176 576 aaPredicted RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 AGKQ53H12 422 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 KHDRBS2Q5VWX1 349 aaKnown RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 LRRC66Q68CR7 880 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 NCR3LG1Q68D85 454 aa2.22□□□□□ -2.05
SPG11-206ENST00000558093 ZNF57Q68EA5 555 aaPredicted RBP2.22□□□□□ -2.05
SPG11-206ENST00000558093 OR5M10Q6IEU7 315 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms