RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 LGI1O95970 557 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 IFNA14P01570 189 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 GPIP06744 558 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 PNMTP11086 282 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 PRF1P14222 555 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 IDUAP35475 653 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 KCNJ5P48544 419 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 TLE4Q04727 773 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 PDK3Q15120 406 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 ELOA3BQ3SY89 546 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 GLIPR1L2Q4G1C9 344 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 FAM91A1Q658Y4 838 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 ZNF474Q6S9Z5 364 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-211ENST00000557623 C5orf46Q6UWT4 87 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 HACD2Q6Y1H2 254 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 BEND4Q6ZU67 534 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 PIGWQ7Z7B1 504 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 ATG4DQ86TL0 474 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-211ENST00000557623 TREML1Q86YW5 311 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 TUSC5Q8IXB3 177 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 ZNF610Q8N9Z0 462 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 SMYD1Q8NB12 490 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 ELOA3Q8NG57 546 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 PIGXQ8TBF5 258 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 STK35Q8TDR2 534 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 C3orf49Q96BT1 292 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 ZNF583Q96ND8 569 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 PSD2Q9BQI7 771 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 TAPBPLQ9BX59 468 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 TMEM27Q9HBJ8 222 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 MCCC2Q9HCC0 563 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 EMC3Q9P0I2 261 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 NDRG3Q9UGV2 375 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 NBPF19A0A087WUL8 3843 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 ZC3H12DA2A288 527 aaKnown RBP11.12□□□□□ -0.63
SLIRP-211ENST00000557623 GCM2O75603 506 aaPredicted RBP11.12□□□□□ -0.63
SLIRP-211ENST00000557623 DCTN3O75935 186 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 GOSR1O95249 250 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 OPN1SWP03999 348 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 EPXP11678 715 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 IMPDH2P12268 514 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 FPR1P21462 350 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 NUDT2P50583 147 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 HOXC5Q00444 222 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 RELBQ01201 579 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 SNTB1Q13884 538 aaKnown RBP11.12□□□□□ -0.63
SLIRP-211ENST00000557623 DUSP7Q16829 419 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 ALG10BQ5I7T1 473 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 ABLIM2Q6H8Q1 611 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 ULK3Q6PHR2 472 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 PAQR6Q6TCH4 344 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 C6orf89Q6UWU4 347 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 COMTD1Q86VU5 262 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 OR2T12Q8NG77 320 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 SLC47A1Q96FL8 570 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 DACH2Q96NX9 599 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 ARHGDIGQ99819 225 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 GPATCH1Q9BRR8 931 aaKnown RBP11.12□□□□□ -0.63
SLIRP-211ENST00000557623 RSPO3Q9BXY4 272 aaPredicted RBP11.12□□□□□ -0.63
SLIRP-211ENST00000557623 C12orf49Q9H741 205 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 CRIM1Q9NZV1 1036 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 BAG5Q9UL15 447 aa11.12□□□□□ -0.63
SLIRP-211ENST00000557623 SETXQ7Z333 2677 aaKnown RBP11.12□□□□□ -0.63
SLIRP-211ENST00000557623 IGKV3D-15A0A087WSY6 115 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 A0A1B0GWA3 101 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 ELOVL7A1L3X0 281 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 SH3D21A4FU49 640 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 TMEM229AB2RXF0 380 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 C16orf97H3BN30 126 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 GPR171O14626 319 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 FMO6PO60774 539 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 AHSA1O95433 338 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 HTR2AP28223 471 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 H3F3AP84243 136 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 FAM27E3Q08E93 113 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 BNIP2Q12982 314 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 CEACAM7Q14002 265 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 OR1Q1Q15612 314 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 OR7A5Q15622 319 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 NRF1Q16656 503 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 EXOC3L2Q2M3D2 409 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 C1orf140Q5VVS0 124 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 ZNF613Q6PF04 617 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 GALNT5Q7Z7M9 940 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 MICU2Q8IYU8 434 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 GPR32P1Q8NGA4 272 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 LINC01560Q8TB33 94 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 PROX1Q92786 737 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 SLC38A4Q969I6 547 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 ZNF775Q96BV0 537 aaPredicted RBP11.11□□□□□ -0.63
SLIRP-211ENST00000557623 TAMM41Q96BW9 452 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 DNAJA3Q96EY1 480 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 LRRC37BQ96QE4 947 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 MCHR1Q99705 422 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 SLC9A8Q9Y2E8 581 aa11.11□□□□□ -0.63
SLIRP-211ENST00000557623 FREM1Q5H8C1 2179 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 A0A0B4J2E0 115 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 A0A1B0GX12 115 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 LIPT2A6NK58 231 aa11.1□□□□□ -0.63
SLIRP-211ENST00000557623 CCT8L1PA6NM43 557 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms