RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SUSD5O60279 629 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 RAB36O95755 333 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 PRR23D2P0DMB1 279 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-233ENST00000557529 ZNF3P17036 446 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 PRKCAP17252 672 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 CCNA2P20248 432 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 ACVR2AP27037 513 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 HTR1FP30939 366 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 RPL4P36578 427 aaKnown RBP11.33□□□□□ -0.6
SHMT2-233ENST00000557529 MTNR1AP48039 350 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 GABREP78334 506 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 BICRALQ6AI39 1079 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 OR5M10Q6IEU7 315 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 H3F3CQ6NXT2 135 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 JMJD6Q6NYC1 403 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-233ENST00000557529 IL20RBQ6UXL0 311 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 NANOGNBQ7Z5D8 188 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 ADGRG3Q86Y34 549 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 CPOQ8IVL8 374 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 GPALPP1Q8IXQ4 340 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 LRRC17Q8N6Y2 441 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 RAB2BQ8WUD1 216 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 NMD3Q96D46 503 aaKnown RBP11.33□□□□□ -0.6
SHMT2-233ENST00000557529 LGALS12Q96DT0 336 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 KTI12Q96EK9 354 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-233ENST00000557529 RNFT2Q96EX2 444 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 ERMAPQ96PL5 475 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-233ENST00000557529 DOK1Q99704 481 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 BCL7BQ9BQE9 202 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 YIPF3Q9GZM5 350 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 RACGAP1Q9H0H5 632 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 FGF20Q9NP95 211 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-233ENST00000557529 HINT3Q9NQE9 182 aaKnown RBP11.33□□□□□ -0.6
SHMT2-233ENST00000557529 HPF1Q9NWY4 346 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 MED11Q9P086 117 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 CHRNA9Q9UGM1 479 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 ERGIC3Q9Y282 383 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 FRYLO94915 3013 aa11.33□□□□□ -0.6
SHMT2-233ENST00000557529 SDK2Q58EX2 2172 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 LOC101059948A0A1B0GTJ6 334 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 TMEM72A0PK05 275 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 C2orf72A6NCS6 295 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 LRRN3E7EW58 273 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 OR2T1O43869 369 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 NPIPB7O75200 414 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 AHSA1O95433 338 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 SLC2A10O95528 541 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 BGLAPP02818 100 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 LCKP06239 509 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 ASAH2BP0C7U1 165 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 ADORA3P0DMS8 318 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 CEACAM1P13688 526 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 APEHP13798 732 aaKnown RBP11.32□□□□□ -0.6
SHMT2-233ENST00000557529 MYL12AP19105 171 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 F8A1P23610 371 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 GSTT1P30711 240 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 IL10RAQ13651 578 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 SLC25A53Q5H9E4 307 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 SLC35F1Q5T1Q4 408 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 FAM69AQ5T7M9 428 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 SLC22A10Q63ZE4 541 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 FCRLBQ6BAA4 426 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 PLBD1Q6P4A8 553 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 POMZP3Q6PJE2 187 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 MAMDC2Q7Z304 686 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-233ENST00000557529 OR4K17Q8NGC6 315 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 OR52I1Q8NGK6 324 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 PAQR8Q8TEZ7 354 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 TAAR8Q969N4 342 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 KIAA1143Q96AT1 154 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-233ENST00000557529 MRGPRX4Q96LA9 322 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 SGCZQ96LD1 299 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 FRMD6Q96NE9 622 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 MOGAT1Q96PD6 335 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 TSC22D3Q99576 134 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 TAPBPLQ9BX59 468 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 ANGPTL4Q9BY76 406 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 PTGES2Q9H7Z7 377 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 NRIP3Q9NQ35 241 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 CHCHD3Q9NX63 227 aaKnown RBP11.32□□□□□ -0.6
SHMT2-233ENST00000557529 IER3IP1Q9Y5U9 82 aa11.32□□□□□ -0.6
SHMT2-233ENST00000557529 ANKRD33BA6NCL7 494 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 SLC22A31A6NKX4 558 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 MCIDASD6RGH6 385 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 PROB1E7EW31 1015 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 BLOC1S5-TXNDC5H3BN57 136 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 IMPA2O14732 288 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 ZNF208O43345 1280 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 TSPAN19P0C672 248 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 UQCRC1P31930 480 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 RPS5P46782 204 aaKnown RBP11.31□□□□□ -0.6
SHMT2-233ENST00000557529 LTBQ06643 244 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 Q0VFX4 171 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 ITGADQ13349 1161 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 ATP1A4Q13733 1029 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 MFSD13AQ14CX5 517 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 TIGD6Q17RP2 521 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 C1orf140Q5VVS0 124 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 NIPAL3Q6P499 406 aa11.31□□□□□ -0.6
SHMT2-233ENST00000557529 ARSKQ6UWY0 536 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms