RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ITGA5P08648 1049 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 UQCRBP14927 111 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 EPS8Q12929 822 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 SLC17A1Q14916 467 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 COX20Q5RI15 118 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 MRPL2Q5T653 305 aaKnown RBP13.96□□□□□ -0.17
TUBB3-213ENST00000557262 PAQR6Q6TCH4 344 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 CASP12Q6UXS9 341 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 PEX5LQ8IYB4 626 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 ZNF440Q8IYI8 595 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 FBXL14Q8N1E6 418 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 WDR31Q8NA23 367 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 C1QTNF6Q9BXI9 259 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 SLC7A10Q9NS82 523 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 THAP1Q9NVV9 213 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 DCTN4Q9UJW0 460 aa13.96□□□□□ -0.17
TUBB3-213ENST00000557262 ZC3H12DA2A288 527 aaKnown RBP13.95□□□□□ -0.18
TUBB3-213ENST00000557262 M0R1B8 84 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 RFXANKO14593 260 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 CD5LO43866 347 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 IL6P05231 212 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 CXCR1P25024 350 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 EPHA3P29320 983 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 FABP6P51161 128 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 IRX1P78414 480 aaPredicted RBP13.95□□□□□ -0.18
TUBB3-213ENST00000557262 TGFBR3Q03167 851 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 C1QTNF12Q5T7M4 302 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 TSPO2Q5TGU0 170 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 MUC15Q8N387 334 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 C17orf78Q8N4C9 275 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 ANKRD42Q8N9B4 389 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 PNPT1Q8TCS8 783 aaKnown RBP13.95□□□□□ -0.18
TUBB3-213ENST00000557262 ZBTB9Q96C00 473 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 SF3B5Q9BWJ5 86 aaKnown RBP13.95□□□□□ -0.18
TUBB3-213ENST00000557262 CACNG6Q9BXT2 260 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 AMBRA1Q9C0C7 1298 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 RLIMQ9NVW2 624 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 RAB21Q9UL25 225 aa13.95□□□□□ -0.18
TUBB3-213ENST00000557262 SONP18583 2426 aaKnown RBP13.95□□□□□ -0.18
TUBB3-213ENST00000557262 SLCO1B7G3V0H7 640 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 GPIP06744 558 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 WDR4P57081 412 aaKnown RBP13.94□□□□□ -0.18
TUBB3-213ENST00000557262 DSCR9P59020 149 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 SPOCK1Q08629 439 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 CEACAM7Q14002 265 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 RAB35Q15286 201 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 MAPK11Q15759 364 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 OTUD3Q5T2D3 398 aaPredicted RBP13.94□□□□□ -0.18
TUBB3-213ENST00000557262 C9orf135Q5VTT2 229 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 C11orf71Q6IPW1 123 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 ZNF544Q6NX49 715 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 C1orf162Q8NEQ5 155 aaPredicted RBP13.94□□□□□ -0.18
TUBB3-213ENST00000557262 OR10H5Q8NGA6 315 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 OR52P1PQ8NH57 321 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 TMEM45BQ96B21 275 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 PIF1Q9H611 641 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 SLC17A5Q9NRA2 495 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 YAE1D1Q9NRH1 226 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 CALML5Q9NZT1 146 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 AMDHD2Q9Y303 409 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 ABCA1O95477 2261 aa13.94□□□□□ -0.18
TUBB3-213ENST00000557262 CDHR4A6H8M9 788 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 LIPT2A6NK58 231 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 SNNO75324 88 aaPredicted RBP13.93□□□□□ -0.18
TUBB3-213ENST00000557262 SLC22A3O75751 556 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 AKR7A3O95154 331 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 GKN3PP0CG01 181 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 ZCCHC18P0CG32 403 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 KITP10721 976 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 IDO1P14902 403 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 MPGP29372 298 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 ACAA2P42765 397 aaKnown RBP13.93□□□□□ -0.18
TUBB3-213ENST00000557262 CRATP43155 626 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 NUDT6P53370 316 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 MVDP53602 400 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 PRPS1P60891 318 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 COPZ1P61923 177 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 OR7A5Q15622 319 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 ZSWIM7Q19AV6 140 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 PDCD4Q53EL6 469 aaKnown RBP13.93□□□□□ -0.18
TUBB3-213ENST00000557262 NXNQ6DKJ4 435 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 TMEM225Q6GV28 225 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 WBP2NLQ6ICG8 309 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 AAED1Q7RTV5 226 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 VRK2Q86Y07 508 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 TMEM99Q8N816 258 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 ZIC4Q8N9L1 334 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 FKRPQ9H9S5 495 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 SLC6A13Q9NSD5 602 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 P2RX2Q9UBL9 471 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 ZNF232Q9UNY5 417 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 ATP23Q9Y6H3 246 aa13.93□□□□□ -0.18
TUBB3-213ENST00000557262 FBN1P35555 2871 aaKnown RBP13.93□□□□□ -0.18
TUBB3-213ENST00000557262 CHD3Q12873 2000 aaKnown RBP13.93□□□□□ -0.18
TUBB3-213ENST00000557262 ALPK2Q86TB3 2170 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 CR1P17927 2039 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 TMEM120BA0PK00 339 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 FAM234BA2RU67 622 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 ANP32DO95626 131 aa13.92□□□□□ -0.18
TUBB3-213ENST00000557262 TFPTP0C1Z6 253 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms