RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 C10orf107Q8IVU9 208 aa7.84□□□□□ -1.15
HNRNPC-227ENST00000556897 C3orf56Q8N813 242 aa7.84□□□□□ -1.15
HNRNPC-227ENST00000556897 SEMA6DQ8NFY4 1073 aa7.84□□□□□ -1.15
HNRNPC-227ENST00000556897 TWIST2Q8WVJ9 160 aa7.84□□□□□ -1.15
HNRNPC-227ENST00000556897 COQ8BQ96D53 544 aa7.84□□□□□ -1.15
HNRNPC-227ENST00000556897 ZNF385AQ96PM9 386 aaKnown RBP7.84□□□□□ -1.15
HNRNPC-227ENST00000556897 C1orf50Q9BV19 199 aa7.84□□□□□ -1.15
HNRNPC-227ENST00000556897 KATNB1Q9BVA0 655 aa7.84□□□□□ -1.15
HNRNPC-227ENST00000556897 OBP2BQ9NPH6 170 aa7.84□□□□□ -1.15
HNRNPC-227ENST00000556897 TRAPPC4Q9Y296 219 aa7.84□□□□□ -1.15
HNRNPC-227ENST00000556897 SLC35A3Q9Y2D2 325 aa7.84□□□□□ -1.15
HNRNPC-227ENST00000556897 TMED7-TICAM2A0A0A6YYA0 188 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 RNF103-CHMP3A0A140T963 221 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 TMEM72A0PK05 275 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 SH3PXD2BA1X283 911 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 ZC3H12DA2A288 527 aaKnown RBP7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 CLDN24A6NM45 220 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 LYPLA1O75608 230 aaPredicted RBP7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 KRT33AO76009 404 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 PDE5AO76074 875 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 LGI1O95970 557 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 AK1P00568 194 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 CHRNGP07510 517 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 ERCC1P07992 297 aaPredicted RBP7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 CECR9P0C854 216 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 IFNGR1P15260 489 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 MAPK1P28482 360 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 CALCRP30988 508 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 CRHR1P34998 444 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 IDH2P48735 452 aaKnown RBP7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 DVL1P1P54792 670 aaPredicted RBP7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 UBE2NP61088 152 aaKnown RBP7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 TUBA1BP68363 451 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 TUBA4AP68366 448 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 NAAAQ02083 359 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 PLAURQ03405 335 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 LGALS3BPQ08380 585 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 UGT3A2Q3SY77 523 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 FAM153CQ494X1 144 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 ATP6AP1LQ52LC2 224 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 IL23RQ5VWK5 629 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 TYW3Q6IPR3 259 aaKnown RBP7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 ANKRD16Q6P6B7 361 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 TUBA1AQ71U36 451 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 AAED1Q7RTV5 226 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 C6orf120Q7Z4R8 191 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 CLECL1Q8IZS7 167 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 ZNF786Q8N393 782 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 SVOPLQ8N434 492 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 NATD1Q8N6N6 113 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 ZIC4Q8N9L1 334 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 POMGNT2Q8NAT1 580 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 PLPP7Q8NBV4 271 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 OR9K2Q8NGE7 335 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 SGMS2Q8NHU3 365 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 AGR3Q8TD06 166 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 ZFAND2BQ8WV99 257 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 NEU4Q8WWR8 484 aaPredicted RBP7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 RAB8BQ92930 207 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 TMEM45BQ96B21 275 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 ZG16BQ96DA0 208 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 ZMYND19Q96E35 227 aaPredicted RBP7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 AURKBQ96GD4 344 aaPredicted RBP7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 BOD1Q96IK1 185 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 PPP3R2Q96LZ3 170 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 PRPF18Q99633 342 aaKnown RBP7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 NAA11Q9BSU3 229 aaPredicted RBP7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 DUSP26Q9BV47 211 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 GATA5Q9BWX5 397 aaPredicted RBP7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 OR51I1Q9H343 314 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 SEC61A2Q9H9S3 476 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 EXD2Q9NVH0 621 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 TMEM45AQ9NWC5 275 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 PCDHGB4Q9UN71 923 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 TMED7Q9Y3B3 224 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 WDR45Q9Y484 360 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 PCDHB14Q9Y5E9 798 aa7.83□□□□□ -1.16
HNRNPC-227ENST00000556897 A0A096LPE4 126 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 A0A0A6YYJ9 748 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 A0A1W2PPZ6 126 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 SLCO1B7G3V0H7 640 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 LYNX1G3V0Z9 82 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 hCG_2039718K7EN88 272 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 NR5A2O00482 541 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 AP3D1O14617 1153 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 ZNF208O43345 1280 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 TRIM13O60858 407 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 AKR7A3O95154 331 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 FGF4P08620 206 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 OR12D1P0DN82 309 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 LYNX1P0DP58 116 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 PRPS1L1P21108 318 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 PCMT1P22061 227 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 TACR3P29371 465 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 THBS4P35443 961 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 HTR3AP46098 478 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 COMPP49747 757 aaPredicted RBP7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 KCNJ10P78508 379 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 HGFACQ04756 655 aa7.82□□□□□ -1.16
HNRNPC-227ENST00000556897 RIN1Q13671 783 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms