RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 POM121L2Q96KW2 1035 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 FCRL1Q96LA6 429 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 S100A13Q99584 98 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 AGPAT1Q99943 283 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 FSD1LQ9BXM9 530 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 SLIRPQ9GZT3 109 aaKnown RBP5.72□□□□□ -1.49
TDP1-215ENST00000556498 BOLA2Q9H3K6 86 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 PIGMQ9H3S5 423 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 MEAF6Q9HAF1 191 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 LHX9Q9NQ69 397 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 TRIM36Q9NQ86 728 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 MIEF1Q9NQG6 463 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 FOXJ2Q9P0K8 574 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 HCN3Q9P1Z3 774 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 SLCO3A1Q9UIG8 710 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 CRLS1Q9UJA2 301 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 SERTAD3Q9UJW9 196 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 ZNF490Q9ULM2 529 aaPredicted RBP5.72□□□□□ -1.49
TDP1-215ENST00000556498 RASD1Q9Y272 281 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 NME7Q9Y5B8 376 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 MADDQ8WXG6 1647 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 NEXMIFQ5QGS0 1516 aa5.72□□□□□ -1.49
TDP1-215ENST00000556498 CLTCQ00610 1675 aaKnown RBP5.72□□□□□ -1.49
TDP1-215ENST00000556498 A0A0G2JND7 137 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 MYOCOSA0A1B0GUC4 107 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 ZNF99A8MXY4 864 aaPredicted RBP5.71□□□□□ -1.5
TDP1-215ENST00000556498 F6UZH7 168 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 FAAHO00519 579 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 NFIBO00712 420 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 EI24O14681 340 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 WDR1O75083 606 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 SNNO75324 88 aaPredicted RBP5.71□□□□□ -1.5
TDP1-215ENST00000556498 MOSPD3O75425 235 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 SC5DO75845 299 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 CXCL14O95715 111 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 CSF3P09919 207 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 FUT1P19526 365 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 COMTP21964 271 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 CST5P28325 142 aaPredicted RBP5.71□□□□□ -1.5
TDP1-215ENST00000556498 CEACAM8P31997 349 aaPredicted RBP5.71□□□□□ -1.5
TDP1-215ENST00000556498 RPL4P36578 427 aaKnown RBP5.71□□□□□ -1.5
TDP1-215ENST00000556498 ADCYAP1R1P41586 468 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 RFX3P48380 749 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 OR4D2P58180 307 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 PTENP60484 403 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 MAXP61244 160 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 CXADRP78310 365 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 FAM3AP98173 230 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 IRF9Q00978 393 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 MESP2Q0VG99 397 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 AIMP2Q13155 320 aaKnown RBP5.71□□□□□ -1.5
TDP1-215ENST00000556498 SRSF6Q13247 344 aaKnown RBP5.71□□□□□ -1.5
TDP1-215ENST00000556498 SKP2Q13309 424 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 UBE2V1Q13404 147 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 SHHQ15465 462 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 NEDD8Q15843 81 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 PCK2Q16822 640 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 DUOXA1Q1HG43 343 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 TMEM241Q24JQ0 296 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 SLC36A2Q495M3 483 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 AGKQ53H12 422 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 CBWD3Q5JTY5 395 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 FAM74A1Q5RGS3 127 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 CBWD5Q5RIA9 395 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 CATSPEREQ5SY80 951 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 NCMAPQ5T1S8 102 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 LGSNQ5TDP6 509 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 WDR88Q6ZMY6 472 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 ACOT7LQ6ZUV0 252 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 TMEM179Q6ZVK1 233 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 H1FNTQ75WM6 255 aaPredicted RBP5.71□□□□□ -1.5
TDP1-215ENST00000556498 SSX6Q7RTT6 188 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 SLC29A4Q7RTT9 530 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 ZNF720Q7Z2F6 126 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 CBWD2Q8IUF1 395 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 TRAPPC5Q8IUR0 188 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 LINC00346Q8IVM7 164 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 MMP21Q8N119 569 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 SLC34A3Q8N130 599 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 WDTC1Q8N5D0 677 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 PROKR2Q8NFJ6 384 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 DNERQ8NFT8 737 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 OR4C5Q8NGB2 326 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 OR4E2Q8NGC2 313 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 OR1K1Q8NGR3 316 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 OR9A4Q8NGU2 314 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 RHEBL1Q8TAI7 183 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 SPPL2BQ8TCT7 592 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 C2CD4CQ8TF44 421 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 DUSP19Q8WTR2 217 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 UBTD2Q8WUN7 234 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 RAB40AQ8WXH6 277 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 SLC35C1Q96A29 364 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 MRPS24Q96EL2 167 aaKnown RBP5.71□□□□□ -1.5
TDP1-215ENST00000556498 MVB12AQ96EY5 273 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 NEIL1Q96FI4 390 aaPredicted RBP5.71□□□□□ -1.5
TDP1-215ENST00000556498 APIPQ96GX9 242 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 FBXL20Q96IG2 436 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 HARBI1Q96MB7 349 aa5.71□□□□□ -1.5
TDP1-215ENST00000556498 OR5B12Q96R08 314 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms