RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 CCNJQ5T5M9 372 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 RNF220Q5VTB9 566 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 C12orf54Q6X4T0 127 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 NUFIP2Q7Z417 695 aaKnown RBP8.82□□□□□ -1
SCFD1-220ENST00000556486 SZRD1Q7Z422 152 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 DTX2Q86UW9 622 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 P2RY8Q86VZ1 359 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 TUSC5Q8IXB3 177 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 RIMKLAQ8IXN7 391 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 OR10H5Q8NGA6 315 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 CLHC1Q8NHS4 586 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 PHOSPHO1Q8TCT1 267 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 SFXN5Q8TD22 340 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 GPR119Q8TDV5 335 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 TWIST2Q8WVJ9 160 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 CDS1Q92903 461 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 MOAP1Q96BY2 351 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 PPP3R2Q96LZ3 170 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 PSD2Q9BQI7 771 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 NMUR2Q9GZQ4 415 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 BARX1Q9HBU1 254 aaPredicted RBP8.82□□□□□ -1
SCFD1-220ENST00000556486 EML4Q9HC35 981 aaKnown RBP8.82□□□□□ -1
SCFD1-220ENST00000556486 ATAD3AQ9NVI7 634 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 TMEM160Q9NX00 188 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 CISD1Q9NZ45 108 aaKnown RBP8.82□□□□□ -1
SCFD1-220ENST00000556486 KLHL9Q9P2J3 617 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 FBLN5Q9UBX5 448 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 DTNAQ9Y4J8 743 aa8.82□□□□□ -1
SCFD1-220ENST00000556486 ZNF724A8MTY0 619 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 PIP5K1BO14986 540 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 CYTIPO60759 359 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 PGM3O95394 542 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 LAMP1P11279 417 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 SERPINB5P36952 375 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 CCT3P49368 545 aaKnown RBP8.81□□□□□ -1
SCFD1-220ENST00000556486 LOXL1Q08397 574 aaPredicted RBP8.81□□□□□ -1
SCFD1-220ENST00000556486 SPOCK1Q08629 439 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 GGTLC2Q14390 218 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 PDK3Q15120 406 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 TOMM34Q15785 309 aaPredicted RBP8.81□□□□□ -1
SCFD1-220ENST00000556486 LSM12Q3MHD2 195 aaKnown RBP8.81□□□□□ -1
SCFD1-220ENST00000556486 TMEM176BQ3YBM2 270 aaPredicted RBP8.81□□□□□ -1
SCFD1-220ENST00000556486 TIMM23BQ5SRD1 257 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 C3orf33Q6P1S2 294 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 BANPQ8N9N5 519 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 OR7A2PQ8NGA2 310 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 OR5W2Q8NH69 310 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 KIF18AQ8NI77 898 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 ADAMTS15Q8TE58 950 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.81□□□□□ -1
SCFD1-220ENST00000556486 ST8SIA1Q92185 356 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 FAM168AQ92567 244 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 ZNF75CPQ92670 426 aaPredicted RBP8.81□□□□□ -1
SCFD1-220ENST00000556486 ZNF524Q96C55 264 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 OTUB1Q96FW1 271 aaPredicted RBP8.81□□□□□ -1
SCFD1-220ENST00000556486 RADILQ96JH8 1075 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 CXorf36Q9H7Y0 433 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 KCNS2Q9ULS6 477 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 FAF1Q9UNN5 650 aaPredicted RBP8.81□□□□□ -1
SCFD1-220ENST00000556486 CARD8Q9Y2G2 431 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 PKD1L1Q8TDX9 2849 aa8.81□□□□□ -1
SCFD1-220ENST00000556486 IGKV3D-15A0A087WSY6 115 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 TMEM233B4DJY2 109 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 SHISA9B4DS77 424 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 SMAD9O15198 467 aaKnown RBP8.8□□□□□ -1
SCFD1-220ENST00000556486 ZNF264O43296 627 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 NUDT14O95848 222 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 AK1P00568 194 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 ADAP00813 363 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 FESP07332 822 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 CHRNGP07510 517 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 UBL4AP11441 157 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 PRPS1L1P21108 318 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 PEX2P28328 305 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 SLC7A1P30825 629 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 SKP2Q13309 424 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 CBFBQ13951 182 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 PTGR1Q14914 329 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 ZNF141Q15928 474 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 GALNTL6Q49A17 601 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 ARL13AQ5H913 290 aaPredicted RBP8.8□□□□□ -1
SCFD1-220ENST00000556486 C6orf136Q5SQH8 315 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 C1QTNF12Q5T7M4 302 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 LIPNQ5VXI9 398 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 FAM166AQ6J272 317 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 BHLHB9Q6PI77 547 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 BHLHA15Q7RTS1 189 aaPredicted RBP8.8□□□□□ -1
SCFD1-220ENST00000556486 DDIASQ8IXT1 998 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 CCDC63Q8NA47 563 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 FAM71CQ8NEG0 241 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 ARL8AQ96BM9 186 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 FOXRED1Q96CU9 486 aaPredicted RBP8.8□□□□□ -1
SCFD1-220ENST00000556486 APOPT1Q96IL0 206 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 ADAD1Q96M93 576 aaKnown RBP8.8□□□□□ -1
SCFD1-220ENST00000556486 SDF2Q99470 211 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 PRPF18Q99633 342 aaKnown RBP8.8□□□□□ -1
SCFD1-220ENST00000556486 FAIMQ9NVQ4 179 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 ASH2LQ9UBL3 628 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 KCNE3Q9Y6H6 103 aa8.8□□□□□ -1
SCFD1-220ENST00000556486 NUP214P35658 2090 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms