RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 TCEA1P23193 301 aaKnown RBP8.32□□□□□ -1.08
ACTN1-218ENST00000556343 MST1P26927 711 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 POU1F1P28069 291 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 RFC3P40938 356 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 MAGEA5P43359 124 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 GPR4P46093 362 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 RPS5P46782 204 aaKnown RBP8.32□□□□□ -1.08
ACTN1-218ENST00000556343 SMSP52788 366 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 CRISP1P54107 249 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 AQP4P55087 323 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 OR2B6P58173 313 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 IL18R1Q13478 541 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 SF3B4Q15427 424 aaKnown RBP eCLIP8.32□□□□□ -1.08
ACTN1-218ENST00000556343 BCL2A1Q16548 175 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 ZNF74Q16587 644 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 ZIK1Q3SY52 487 aaPredicted RBP8.32□□□□□ -1.08
ACTN1-218ENST00000556343 ZBED5Q49AG3 693 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 FAM180AQ6UWF9 173 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 TMPPEQ6ZT21 453 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 ESPNLQ6ZVH7 1005 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 CHMP1BQ7LBR1 199 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 NANOGNBQ7Z5D8 188 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 GALNT5Q7Z7M9 940 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 DEPDC4Q8N2C3 294 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 CLDN22Q8N7P3 220 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 RBMXL3Q8N7X1 1067 aaKnown RBP8.32□□□□□ -1.08
ACTN1-218ENST00000556343 SCAIQ8N9R8 606 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 SETD9Q8NE22 299 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 OR5M1Q8NGP8 315 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 CYGBQ8WWM9 190 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 TAAR8Q969N4 342 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 SLC25A36Q96CQ1 311 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 OR5B2Q96R09 309 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 APOL4Q9BPW4 351 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 NIPSNAP1Q9BPW8 284 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 DEFB127Q9H1M4 99 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 MEPEQ9NQ76 525 aaPredicted RBP8.32□□□□□ -1.08
ACTN1-218ENST00000556343 ZMIZ1Q9ULJ6 1067 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 BAIAP2Q9UQB8 552 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 IGKV1D-42A0A075B6H8 117 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 LOC100130705A0A1B0GUX0 176 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 SHISA8B8ZZ34 492 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 H3BML4 177 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 M0R3G1 203 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 SULT2B1O00204 365 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 SEC14L5O43304 696 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 PIP5K1CO60331 668 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 NPIPB7O75200 414 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 NDUFB2O95178 105 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 PMS2P2O95744 297 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 HMGN1P05114 100 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 ACADSP16219 412 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 MAKP20794 623 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 SLC6A6P31641 620 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 SFTPDP35247 375 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 RPL4P36578 427 aaKnown RBP8.31□□□□□ -1.08
ACTN1-218ENST00000556343 CAPGP40121 348 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 CARD18P57730 90 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 PMS2P3Q13401 168 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 OR7A5Q15622 319 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 LINC00303Q3SY05 128 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 PLEKHN1Q494U1 663 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-218ENST00000556343 KRTCAP3Q53RY4 240 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 SMARCD3Q6STE5 483 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 KLHL17Q6TDP4 642 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 H1FNTQ75WM6 255 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-218ENST00000556343 P3H2Q8IVL5 708 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 OR5J2Q8NH18 312 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 OR51A7Q8NH64 312 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 FANK1Q8TC84 345 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 SMPDL3BQ92485 455 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 SARAFQ96BY9 339 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 KTI12Q96EK9 354 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-218ENST00000556343 KLHL15Q96M94 604 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 ZNF570Q96NI8 536 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 KLHDC3Q9BQ90 382 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 ADI1Q9BV57 179 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 GABARAPL3Q9BY60 117 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 TOR3AQ9H497 397 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 ZDHHC11Q9H8X9 412 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 ZNF71Q9NQZ8 489 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-218ENST00000556343 C20orf141Q9NUB4 165 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 TBC1D23Q9NUY8 699 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 FAM118AQ9NWS6 357 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 ALKBH4Q9NXW9 302 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 MRPL39Q9NYK5 338 aaKnown RBP8.31□□□□□ -1.08
ACTN1-218ENST00000556343 B3GALT5Q9Y2C3 310 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 SLC6A5Q9Y345 797 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 LRRC42Q9Y546 428 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 GMPPBQ9Y5P6 360 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 CDH10Q9Y6N8 788 aa8.31□□□□□ -1.08
ACTN1-218ENST00000556343 LIPT2A6NK58 231 aa8.3□□□□□ -1.08
ACTN1-218ENST00000556343 B4DXG7 233 aa8.3□□□□□ -1.08
ACTN1-218ENST00000556343 NPIPA5E9PKD4 350 aa8.3□□□□□ -1.08
ACTN1-218ENST00000556343 BLOC1S5-TXNDC5H3BN57 136 aa8.3□□□□□ -1.08
ACTN1-218ENST00000556343 ERVH48-1M5A8F1 160 aa8.3□□□□□ -1.08
ACTN1-218ENST00000556343 EIF1AYO14602 144 aaKnown RBP8.3□□□□□ -1.08
ACTN1-218ENST00000556343 BCKDKO14874 412 aa8.3□□□□□ -1.08
ACTN1-218ENST00000556343 SLC16A6O15403 523 aa8.3□□□□□ -1.08
ACTN1-218ENST00000556343 KLF4O43474 513 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms