RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 POLR1CO15160 346 aaPredicted RBP6.24□□□□□ -1.41
SLIRP-204ENST00000555890 FRS3O43559 492 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 RGS10O43665 173 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 NOL3O60936 208 aaKnown RBP6.24□□□□□ -1.41
SLIRP-204ENST00000555890 SCRG1O75711 98 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 OR6B1O95007 311 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 EPHA2P29317 976 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 LCN1P31025 176 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 FMO3P31513 532 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 STAT5AP42229 794 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 PPICP45877 212 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 MTNR1BP49286 362 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 ATP12AP54707 1039 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 PSPHP78330 225 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 SRSF2Q01130 221 aaKnown RBP6.24□□□□□ -1.41
SLIRP-204ENST00000555890 TSPAN31Q12999 210 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 TGIF1Q15583 401 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 NSDHLQ15738 373 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 NEDD8Q15843 81 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF141Q15928 474 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 MAPK14Q16539 360 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.24□□□□□ -1.41
SLIRP-204ENST00000555890 ISXQ2M1V0 245 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 EIF2S3LQ2VIR3 472 aaKnown RBP6.24□□□□□ -1.41
SLIRP-204ENST00000555890 VWA2Q5GFL6 755 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 MRPL2Q5T653 305 aaKnown RBP6.24□□□□□ -1.41
SLIRP-204ENST00000555890 PHF19Q5T6S3 580 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 SLX4IPQ5VYV7 408 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 LAIR2Q6ISS4 152 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 RHBDD2Q6NTF9 364 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF613Q6PF04 617 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 B3GNT6Q6ZMB0 384 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 MBOAT2Q6ZWT7 520 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 ZER1Q7Z7L7 766 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 B3GNT8Q7Z7M8 397 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 ZAR1Q86SH2 424 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 PPP1R3BQ86XI6 285 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 GRAMD2AQ8IUY3 354 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF440Q8IYI8 595 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 ENTHD1Q8IYW4 607 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 CDK20Q8IZL9 346 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 RNF113BQ8IZP6 322 aaKnown RBP6.24□□□□□ -1.41
SLIRP-204ENST00000555890 SPARTQ8N0X7 666 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF614Q8N883 585 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF527Q8NB42 609 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 MORN4Q8NDC4 146 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF540Q8NDQ6 660 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 PLPP5Q8NEB5 264 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 C16orf52Q8NHV5 167 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 PTPMT1Q8WUK0 201 aaPredicted RBP6.24□□□□□ -1.41
SLIRP-204ENST00000555890 TRUB1Q8WWH5 349 aaKnown RBP6.24□□□□□ -1.41
SLIRP-204ENST00000555890 C1GALT1C1Q96EU7 318 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 C5orf34Q96MH7 638 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 HS6ST2Q96MM7 605 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 OR6C1Q96RD1 312 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 ITPAQ9BY32 194 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 PRRG3Q9BZD7 231 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 TRIM2Q9C040 744 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 OR8D2Q9GZM6 311 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 DUSP21Q9H596 190 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 CTPS2Q9NRF8 586 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 MAN2C1Q9NTJ4 1040 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 FBXO34Q9NWN3 711 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 SELENONQ9NZV5 590 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 ERVK-18Q9QC07 812 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 RPS6KB2Q9UBS0 482 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 RSL24D1Q9UHA3 163 aaKnown RBP6.24□□□□□ -1.41
SLIRP-204ENST00000555890 COA3Q9Y2R0 106 aaPredicted RBP6.24□□□□□ -1.41
SLIRP-204ENST00000555890 CHST2Q9Y4C5 530 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 CLDN16Q9Y5I7 305 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 CEPT1Q9Y6K0 416 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 COMMD3-BMI1R4GMX3 469 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 X6R8D5 127 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 MGAM2Q2M2H8 2515 aa6.24□□□□□ -1.41
SLIRP-204ENST00000555890 NPIPA5A0A0B4J1W7 369 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 C2orf92A0A1B0GVN3 265 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 TMEM82A0PJX8 343 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 EFCAB10A6NFE3 127 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 OR6C76A6NM76 312 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 SNTNA6NMZ2 147 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF99A8MXY4 864 aaPredicted RBP6.23□□□□□ -1.41
SLIRP-204ENST00000555890 NPIPA7E9PJI5 369 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 HRKO00198 91 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 XPNPEP2O43895 674 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 WBP4O75554 376 aaKnown RBP6.23□□□□□ -1.41
SLIRP-204ENST00000555890 ONECUT2O95948 504 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 HEXBP07686 556 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 NPIPA8P0DM63 369 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 CT45A8P0DMV1 189 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 CT45A9P0DMV2 189 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 HPGDP15428 266 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 ITIH1P19827 911 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 FUT4P22083 530 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 MMP11P24347 488 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 GSSP48637 474 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 ZNF136P52737 540 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 SMSP52788 366 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 SLC37A1P57057 533 aa6.23□□□□□ -1.41
SLIRP-204ENST00000555890 SNRPGP62308 76 aaKnown RBP6.23□□□□□ -1.41
SLIRP-204ENST00000555890 SLC35A2P78381 396 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms