RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 A6NIN4 97 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 SMLR1H3BR10 107 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 OGG1O15527 345 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 AKR7A2O43488 359 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 NOS1APO75052 506 aaPredicted RBP6.43□□□□□ -1.38
TDP1-213ENST00000555880 ITGA10O75578 1167 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 CBX7O95931 251 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 TCRBP04435 133 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 CD1AP06126 327 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 CT62P0C5K7 136 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 EPXP11678 715 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 HIST1H1CP16403 213 aaKnown RBP6.43□□□□□ -1.38
TDP1-213ENST00000555880 EDNRAP25101 427 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 NAA10P41227 235 aaPredicted RBP6.43□□□□□ -1.38
TDP1-213ENST00000555880 EMDP50402 254 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 SNRPD2P62316 118 aaKnown RBP6.43□□□□□ -1.38
TDP1-213ENST00000555880 YPEL5P62699 121 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 HSF2Q03933 536 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 STX4Q12846 297 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 GGTLC2Q14390 218 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 FCN2Q15485 313 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 ALG11Q2TAA5 492 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 CCDC58Q4VC31 144 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 CD276Q5ZPR3 534 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 FAM205BPQ63HN1 556 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 OVCH1Q7RTY7 1134 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 CDH24Q86UP0 819 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 SLITRK4Q8IW52 837 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 CMIPQ8IY22 773 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 SDR9C7Q8NEX9 313 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 OR13C5Q8NGS8 318 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 ZNF431Q8TF32 576 aaPredicted RBP6.43□□□□□ -1.38
TDP1-213ENST00000555880 SMAP2Q8WU79 429 aaPredicted RBP6.43□□□□□ -1.38
TDP1-213ENST00000555880 RIT1Q92963 219 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 PELI1Q96FA3 418 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 RBM18Q96H35 190 aaKnown RBP6.43□□□□□ -1.38
TDP1-213ENST00000555880 PEX11GQ96HA9 241 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 CMTM3Q96MX0 182 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 LMF2Q9BU23 707 aaKnown RBP6.43□□□□□ -1.38
TDP1-213ENST00000555880 ZNF426Q9BUY5 554 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 CACNG6Q9BXT2 260 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 TTTY10Q9BZA0 68 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 TWSG1Q9GZX9 223 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 OR51J1Q9H342 316 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 Q9N2J8 555 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 NRIP3Q9NQ35 241 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 TMEM74BQ9NUR3 256 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 CHRNA9Q9UGM1 479 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 FBXL4Q9UKA2 621 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 CAMK2AQ9UQM7 478 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 IER3IP1Q9Y5U9 82 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 KIR2DS5A0A0G2JLQ3 304 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 A0A0G2JNG1 304 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 A0A1B0GVI7 797 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 A0A1W2PPK0 400 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 ANKRD61A6NGH8 418 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 OR5K4A6NMS3 321 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 EFCAB7A8K855 629 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 KIR2DS3K7RE56 304 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 GNB5O14775 395 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 FABP7O15540 132 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 GSTZ1O43708 216 aaPredicted RBP6.43□□□□□ -1.38
TDP1-213ENST00000555880 SSNA1O43805 119 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 PRAMEF2O60811 474 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 TSC22D2O75157 780 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 TMEM127O75204 238 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 RDH16O75452 317 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 TNFP01375 233 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 CD3GP09693 182 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 UCHL1P09936 223 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 H2AFB2P0C5Z0 115 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 TFPIP10646 304 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 RNH1P13489 461 aaKnown RBP6.43□□□□□ -1.38
TDP1-213ENST00000555880 GIFP27352 417 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 BTCP35070 178 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 ACAA2P42765 397 aaKnown RBP6.43□□□□□ -1.38
TDP1-213ENST00000555880 SRP9P49458 86 aaKnown RBP6.43□□□□□ -1.38
TDP1-213ENST00000555880 DIO1P49895 249 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 RAG2P55895 527 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 AP3S2P59780 193 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 KIR2DS5Q14953 304 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 CLPPQ16740 277 aaPredicted RBP6.43□□□□□ -1.38
TDP1-213ENST00000555880 SLC36A2Q495M3 483 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 CDONQ4KMG0 1287 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 RNASE12Q5GAN4 147 aaKnown RBP6.43□□□□□ -1.38
TDP1-213ENST00000555880 SLC35D3Q5M8T2 416 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 ZC3H14Q6PJT7 736 aaKnown RBP6.43□□□□□ -1.38
TDP1-213ENST00000555880 TMEM184AQ6ZMB5 413 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 DPY19L2P2Q6ZN68 376 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 SSX6Q7RTT6 188 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 ZAR1Q86SH2 424 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 SIAH3Q8IW03 269 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 C9orf62Q8N4C0 152 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 OR5H6Q8NGV6 325 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 OR6K6Q8NGW6 343 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 OR14A16Q8NHC5 309 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 RPLP0P6Q8NHW5 317 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 ADAMTS14Q8WXS8 1223 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 YIPF5Q969M3 257 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 ANKRD9Q96BM1 317 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms