RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ZFYVE26Q68DK2 2539 aa11.21□□□□□ -0.61
SHMT2-221ENST00000555773 PCNX3Q9H6A9 2034 aa11.21□□□□□ -0.62
SHMT2-221ENST00000555773 IGSF10Q6WRI0 2623 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 LIPT2A6NK58 231 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 B8ZZF3 427 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 G3V2T6 193 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 SULT2B1O00204 365 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 OR10H3O60404 316 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 EIF1BO60739 113 aaKnown RBP11.2□□□□□ -0.62
SHMT2-221ENST00000555773 IFI30P13284 250 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 ANPEPP15144 967 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 SHC1P29353 583 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 PTGER4P35408 488 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 RPS5P46782 204 aaKnown RBP11.2□□□□□ -0.62
SHMT2-221ENST00000555773 SUCLG1P53597 346 aaKnown RBP11.2□□□□□ -0.62
SHMT2-221ENST00000555773 UGT2B15P54855 530 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 CLDN15P56746 228 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 SLC35A1P78382 337 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 HSF1Q00613 529 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 SRYQ05066 204 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 RCN1Q15293 331 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 SEC23BQ15437 767 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 CTU2Q2VPK5 515 aaKnown RBP11.2□□□□□ -0.62
SHMT2-221ENST00000555773 C1QL3Q5VWW1 255 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 HBMQ6B0K9 141 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 HMBOX1Q6NT76 420 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 C1orf94Q6P1W5 598 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 TMPRSS11FQ6ZWK6 438 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 PRICKLE2Q7Z3G6 844 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 FGD2Q7Z6J4 655 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 P3H2Q8IVL5 708 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 CHERPQ8IWX8 916 aaKnown RBP11.2□□□□□ -0.62
SHMT2-221ENST00000555773 NRMQ8IXM6 262 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 UBQLNLQ8IYU4 475 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 ST6GALNAC3Q8NDV1 305 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 BPIFA2Q96DR5 249 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 SGTBQ96EQ0 304 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 BBC3Q96PG8 261 aaPredicted RBP11.2□□□□□ -0.62
SHMT2-221ENST00000555773 PSD2Q9BQI7 771 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 PTDSS2Q9BVG9 487 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 ZNF835Q9Y2P0 537 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 CORINQ9Y5Q5 1042 aa11.2□□□□□ -0.62
SHMT2-221ENST00000555773 PRRC2CQ9Y520 2896 aaKnown RBP11.2□□□□□ -0.62
SHMT2-221ENST00000555773 RP1L1Q8IWN7 2480 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-221ENST00000555773 BSNQ9UPA5 3926 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 A0A1W2PNR3 127 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 ENO4A6NNW6 628 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 FTCDNL1E5RQL4 147 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 H0Y3Z8 333 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 KPNA4O00629 521 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-221ENST00000555773 PRRG2O14669 202 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 TNFSF11O14788 317 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 SEC14L5O43304 696 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 FZD7O75084 574 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 CH25HO95992 272 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 HIST1H2ABP04908 130 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 IMPDH2P12268 514 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 ANXA8P13928 327 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 GABRA1P14867 456 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 ABOP16442 354 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 FUT1P19526 365 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 EIF1AXP47813 144 aaKnown RBP11.19□□□□□ -0.62
SHMT2-221ENST00000555773 OMPP47874 163 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 DIO1P49895 249 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 AGFG1P52594 562 aaKnown RBP11.19□□□□□ -0.62
SHMT2-221ENST00000555773 IST1P53990 364 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 NUP107P57740 925 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 OR2B6P58173 313 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 PPP1R8Q12972 351 aaKnown RBP11.19□□□□□ -0.62
SHMT2-221ENST00000555773 SGCBQ16585 318 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 ZNF74Q16587 644 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 ANKDD1AQ495B1 522 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 ZNF770Q6IQ21 691 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-221ENST00000555773 HIST3H2AQ7L7L0 130 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 MAMDC2Q7Z304 686 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-221ENST00000555773 ZER1Q7Z7L7 766 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 TMEM179BQ7Z7N9 219 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 C10orf53Q8N6V4 93 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 OR10G2Q8NGC3 310 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 OR10D3Q8NH80 312 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 PFN4Q8NHR9 129 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 FAM57AQ8TBR7 257 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 GNPDA2Q8TDQ7 276 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 HIST1H2ACQ93077 130 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 CPNE4Q96A23 557 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-221ENST00000555773 SDCCAG3Q96C92 435 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 ZHX1-C8orf76Q96EF9 292 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 NAA11Q9BSU3 229 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-221ENST00000555773 SEMA6AQ9H2E6 1030 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 COQ10BQ9H8M1 238 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 FKRPQ9H9S5 495 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 RNPEPL1Q9HAU8 725 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 NANSQ9NR45 359 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 C20orf141Q9NUB4 165 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 PDP1Q9P0J1 537 aaPredicted RBP11.19□□□□□ -0.62
SHMT2-221ENST00000555773 ZNF229Q9UJW7 825 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 MGAT4BQ9UQ53 548 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 CAMK2AQ9UQM7 478 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 NBEAQ8NFP9 2946 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 COL6A6A6NMZ7 2263 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms