RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 DACH2Q96NX9 599 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 PSD2Q9BQI7 771 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 POTEKPQ9BYX7 375 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 ZNF226Q9NYT6 803 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 C6orf203Q9P0P8 240 aaPredicted RBP10.78□□□□□ -0.68
SRP54-206ENST00000555317 SLC9A8Q9Y2E8 581 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 CHST2Q9Y4C5 530 aa10.78□□□□□ -0.68
SRP54-206ENST00000555317 A0A1B0GWA3 101 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 ZC3H12DA2A288 527 aaKnown RBP10.77□□□□□ -0.69
SRP54-206ENST00000555317 A6NNC1 897 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 ZNF724A8MTY0 619 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 FAM220BPB1ANY3 271 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 NDUFAB1O14561 156 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 GSTA4O15217 222 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 TPST1O60507 370 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 C8BP07358 591 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 FPR1P21462 350 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 PCYT1AP49585 367 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 CEACAM7Q14002 265 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 OR7A5Q15622 319 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 GLIPR1L2Q4G1C9 344 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 C1orf140Q5VVS0 124 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 FAM91A1Q658Y4 838 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 ABLIM2Q6H8Q1 611 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 ULK3Q6PHR2 472 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 C5orf46Q6UWT4 87 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 ATG4DQ86TL0 474 aaPredicted RBP10.77□□□□□ -0.69
SRP54-206ENST00000555317 LSMEM1Q8N8F7 131 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 STK35Q8TDR2 534 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 SLC47A1Q96FL8 570 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 LURAP1Q96LR2 239 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 HOPXQ9BPY8 73 aaPredicted RBP10.77□□□□□ -0.69
SRP54-206ENST00000555317 BCO1Q9HAY6 547 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 C12orf10Q9HB07 376 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 ADPRHL2Q9NX46 363 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 BAG5Q9UL15 447 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 ARL2BPQ9Y2Y0 163 aa10.77□□□□□ -0.69
SRP54-206ENST00000555317 NOSIPQ9Y314 301 aaKnown RBP10.77□□□□□ -0.69
SRP54-206ENST00000555317 HRNRQ86YZ3 2850 aaPredicted RBP10.77□□□□□ -0.69
SRP54-206ENST00000555317 LIPT2A6NK58 231 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 CCT8L1PA6NM43 557 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 TMEM229AB2RXF0 380 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 M0R3H8 397 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 FMO6PO60774 539 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 DCTN3O75935 186 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 GOSR1O95249 250 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 LGI1O95970 557 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 IMPDH2P12268 514 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 PPP3CBP16298 524 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 IL32P24001 234 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 HTR2AP28223 471 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 PRDX6P30041 224 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 VEZF1Q14119 521 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 PDK3Q15120 406 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 OR1Q1Q15612 314 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 LRRC23Q53EV4 343 aaPredicted RBP10.76□□□□□ -0.69
SRP54-206ENST00000555317 OTUD3Q5T2D3 398 aaPredicted RBP10.76□□□□□ -0.69
SRP54-206ENST00000555317 SWT1Q5T5J6 900 aaKnown RBP10.76□□□□□ -0.69
SRP54-206ENST00000555317 PAQR6Q6TCH4 344 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 TFAP2EQ6VUC0 442 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 NUFIP2Q7Z417 695 aaKnown RBP10.76□□□□□ -0.69
SRP54-206ENST00000555317 GPAT4Q86UL3 456 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 CALHM3Q86XJ0 350 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 TREML1Q86YW5 311 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 CCDC103Q8IW40 242 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 UBE2J2Q8N2K1 259 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 VANGL1Q8TAA9 524 aaPredicted RBP10.76□□□□□ -0.69
SRP54-206ENST00000555317 SLC38A4Q969I6 547 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 APH1AQ96BI3 265 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 ZNF775Q96BV0 537 aaPredicted RBP10.76□□□□□ -0.69
SRP54-206ENST00000555317 TAMM41Q96BW9 452 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 SLC25A36Q96CQ1 311 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 LRRC37BQ96QE4 947 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 ZNF300Q96RE9 604 aaPredicted RBP10.76□□□□□ -0.69
SRP54-206ENST00000555317 EPYCQ99645 322 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 MCHR1Q99705 422 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 ARHGDIGQ99819 225 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 GPATCH1Q9BRR8 931 aaKnown RBP10.76□□□□□ -0.69
SRP54-206ENST00000555317 POLDIP3Q9BY77 421 aaKnown RBP10.76□□□□□ -0.69
SRP54-206ENST00000555317 CLEC4MQ9H2X3 399 aaPredicted RBP10.76□□□□□ -0.69
SRP54-206ENST00000555317 TESMINQ9Y4I5 508 aa10.76□□□□□ -0.69
SRP54-206ENST00000555317 IGKV3D-15A0A087WSY6 115 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 ELOVL7A1L3X0 281 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 OR2T1O43869 369 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 MRPL33O75394 65 aaKnown RBP10.75□□□□□ -0.69
SRP54-206ENST00000555317 AKR7A3O95154 331 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 KLK2P20151 261 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 CD247P20963 164 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 RPS5P46782 204 aaKnown RBP10.75□□□□□ -0.69
SRP54-206ENST00000555317 OR3A2P47893 321 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 GZMMP51124 257 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 SLC7A2P52569 658 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 IL1RL1Q01638 556 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 DAZAP2Q15038 168 aaPredicted RBP10.75□□□□□ -0.69
SRP54-206ENST00000555317 NRF1Q16656 503 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 DUSP7Q16829 419 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 TMEM225Q6GV28 225 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 C6orf89Q6UWU4 347 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 CASP12Q6UXS9 341 aa10.75□□□□□ -0.69
SRP54-206ENST00000555317 HACD2Q6Y1H2 254 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms