RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 DIRAS1O95057 198 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 SNAPINO95295 136 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 PCMT1P22061 227 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 HMGB2P26583 209 aaKnown RBP3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 GNA11P29992 359 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 HTR1FP30939 366 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 CALCRP30988 508 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 RFC4P35249 363 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 PTGDSP41222 190 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 PKNOX1P55347 436 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 LYZP61626 148 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 KLRB1Q12918 225 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 ZMYND11Q15326 602 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 KLHL38Q2WGJ6 581 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 CEND1Q8N111 149 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 DNAJA4Q8WW22 397 aaPredicted RBP3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 UBE2E3Q969T4 207 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 MARC2Q969Z3 335 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 SLC38A2Q96QD8 506 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 TBX15Q96SF7 602 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 EBF4Q9BQW3 602 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 MAGT1Q9H0U3 335 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 VCPKMTQ9H867 229 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 SH2D2AQ9NP31 389 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 ABCG2Q9UNQ0 655 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 IKBKGQ9Y6K9 419 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 SAMD9Q5K651 1589 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 SH3TC1Q8TE82 1336 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 KANK1Q14678 1352 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 ADGRL1O94910 1474 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 PLEKHH2Q8IVE3 1493 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 RGS16O15492 202 aaPredicted RBP3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 HCRTR1O43613 425 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 GABRR1P24046 479 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 MAGEA8P43361 318 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 CRYBB1P53674 252 aaPredicted RBP3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 BIDP55957 195 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 STX17P56962 302 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 TNFRSF17Q02223 184 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 KLF17Q5JT82 389 aaPredicted RBP3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 PDZK1Q5T2W1 519 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 CCDC71LQ8N9Z2 235 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 OR2L5Q8NG80 312 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 LINC01006Q8NI28 216 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 SHC3Q92529 594 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 CLCC1Q96S66 551 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 HIST1H4GQ99525 98 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 COPS8Q99627 209 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 SELENOIQ9C0D9 397 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 REEP4Q9H6H4 257 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 MCCC2Q9HCC0 563 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 ADAM28Q9UKQ2 775 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 TMCO1Q9UM00 188 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 PIGLQ9Y2B2 252 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 RPL36Q9Y3U8 105 aaKnown RBP3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 TTC21BQ7Z4L5 1316 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 VPS8Q8N3P4 1428 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 NUP153P49790 1475 aaKnown RBP3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 NOTCH3Q9UM47 2321 aa3.86□□□□□ -1.79
CKS1BP1-201ENST00000555221 RAPGEF6Q8TEU7 1601 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 ADCY10Q96PN6 1610 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 FAM240BA0A1B0GVZ2 78 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 KLLNB2CW77 178 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 GOLGA8SH3BPF8 625 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 DCTN6O00399 190 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 UGT1A9O60656 530 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 RAMP3O60896 148 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 BBOX1O75936 387 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 ATP5LO75964 103 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 CLDN9O95484 217 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 UGT1A5P35504 534 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 DUSP3P51452 185 aaPredicted RBP3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 RPS14P62263 151 aaKnown RBP3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 NSUN5P1Q3KNT7 163 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 SAMD4BQ5PRF9 694 aaKnown RBP3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 C11orf71Q6IPW1 123 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 ZNF544Q6NX49 715 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 UTS2BQ765I0 119 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 FAM220AQ7Z4H9 259 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 FTMTQ8N4E7 242 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 FAM83FQ8NEG4 500 aaPredicted RBP3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 SETD7Q8WTS6 366 aaKnown RBP3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 RBKSQ9H477 322 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 YY1AP1Q9H869 796 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 FN3KRPQ9HA64 309 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 FOLH1BQ9HBA9 442 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 SGK2Q9HBY8 427 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 POLE4Q9NR33 117 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 TREM2Q9NZC2 230 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 UGT2A1Q9Y4X1 527 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 AKNAQ7Z591 1439 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 KIAA1107Q9UPP5 1409 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 LRRK1Q38SD2 2015 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 DENND4BO75064 1496 aaPredicted RBP3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 MAGI2Q86UL8 1455 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 MAP3K1Q13233 1512 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 ARAP3Q8WWN8 1544 aa3.85□□□□□ -1.79
CKS1BP1-201ENST00000555221 HECW1Q76N89 1606 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 A0A0G2JRQ6 117 aa3.84□□□□□ -1.79
CKS1BP1-201ENST00000555221 IQANK1A0A1B0GTG1 560 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms