RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 TMEM45BQ96B21 275 aa13.55□□□□□ -0.24
NEDD1-207ENST00000555114 FBXO9Q9UK97 447 aaPredicted RBP13.55□□□□□ -0.24
NEDD1-207ENST00000555114 MOKQ9UQ07 419 aa13.55□□□□□ -0.24
NEDD1-207ENST00000555114 LOC390937A0A1W2PQ73 354 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 SPAG7O75391 227 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 GPIP06744 558 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 NR4A2P43354 598 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 TXNL4AP83876 142 aaKnown RBP13.54□□□□□ -0.24
NEDD1-207ENST00000555114 SQLEQ14534 574 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 SLC17A1Q14916 467 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 CARTPTQ16568 116 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 DPY19L1Q2PZI1 675 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 FAM120AOSQ5T036 256 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 OTUD3Q5T2D3 398 aaPredicted RBP13.54□□□□□ -0.24
NEDD1-207ENST00000555114 TSPO2Q5TGU0 170 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 AP1ARQ63HQ0 302 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 SAXO2Q658L1 398 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 AAED1Q7RTV5 226 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 SLC46A3Q7Z3Q1 461 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 ANKRD46Q86W74 232 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 TRIML2Q8N7C3 387 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 NEURL3Q96EH8 262 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 SF3B5Q9BWJ5 86 aaKnown RBP13.54□□□□□ -0.24
NEDD1-207ENST00000555114 PIF1Q9H611 641 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 MOV10Q9HCE1 1003 aaKnown RBP13.54□□□□□ -0.24
NEDD1-207ENST00000555114 MARCOQ9UEW3 520 aaPredicted RBP13.54□□□□□ -0.24
NEDD1-207ENST00000555114 OSGIN1Q9UJX0 560 aa13.54□□□□□ -0.24
NEDD1-207ENST00000555114 TMEM72A0PK05 275 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 VWC2LB2RUY7 222 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 BCAS1O75363 584 aaPredicted RBP13.53□□□□□ -0.24
NEDD1-207ENST00000555114 LY6HO94772 140 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 CRYAAP02489 173 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 ERCC1P07992 297 aaPredicted RBP13.53□□□□□ -0.24
NEDD1-207ENST00000555114 CDH2P19022 906 aaPredicted RBP13.53□□□□□ -0.24
NEDD1-207ENST00000555114 TACR3P29371 465 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 SERPINF1P36955 418 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 SLC1A3P43003 542 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 CLNS1AP54105 237 aaKnown RBP13.53□□□□□ -0.24
NEDD1-207ENST00000555114 UBE2NP61088 152 aaKnown RBP13.53□□□□□ -0.24
NEDD1-207ENST00000555114 SLC25A3Q00325 362 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 IFFO1Q0D2I5 559 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 PDCD2Q16342 344 aaPredicted RBP13.53□□□□□ -0.24
NEDD1-207ENST00000555114 SWI5Q1ZZU3 235 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 ARIH2OSQ8N7S6 290 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 TESCQ96BS2 214 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 C3orf49Q96BT1 292 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 SORCS2Q96PQ0 1159 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 VRK1Q99986 396 aaPredicted RBP13.53□□□□□ -0.24
NEDD1-207ENST00000555114 SLC35A5Q9BS91 424 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 KATNB1Q9BVA0 655 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 TMEM45AQ9NWC5 275 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 PRDM4Q9UKN5 801 aa13.53□□□□□ -0.24
NEDD1-207ENST00000555114 HEATR1Q9H583 2144 aaKnown RBP13.52□□□□□ -0.24
NEDD1-207ENST00000555114 CFAP73A6NFT4 308 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 OR6C65A6NJZ3 312 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 VSTM5A8MXK1 200 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 B9A039 149 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 ZNF587BE7ETH6 402 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 FAAHO00519 579 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 PDE5AO76074 875 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 BPGMP07738 259 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 IMPDH2P12268 514 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 IL7RP16871 459 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 FUT5Q11128 374 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 GSTA3Q16772 222 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 HMGN2P46Q86SG4 172 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 GPAT4Q86UL3 456 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 ZNF440Q8IYI8 595 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 KIRREL3Q8IZU9 778 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 OR9K2Q8NGE7 335 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 WDR60Q8WVS4 1066 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 CNOT9Q92600 299 aaKnown RBP13.52□□□□□ -0.25
NEDD1-207ENST00000555114 ZG16BQ96DA0 208 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 MSI2Q96DH6 328 aaKnown RBP13.52□□□□□ -0.25
NEDD1-207ENST00000555114 BOD1Q96IK1 185 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 ZNF317Q96PQ6 595 aaPredicted RBP13.52□□□□□ -0.25
NEDD1-207ENST00000555114 TRNT1Q96Q11 434 aaKnown RBP13.52□□□□□ -0.25
NEDD1-207ENST00000555114 SLC38A2Q96QD8 506 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 TAPBPLQ9BX59 468 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 CA10Q9NS85 328 aa13.52□□□□□ -0.25
NEDD1-207ENST00000555114 AGAP5A6NIR3 686 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 CLDN24A6NM45 220 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 AP3D1O14617 1153 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 KLF11O14901 512 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 SCN2BO60939 215 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 SNUPNO95149 360 aaKnown RBP13.51□□□□□ -0.25
NEDD1-207ENST00000555114 TGFAP01135 160 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 MYZAPP0CAP1 466 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 CXCR1P25024 350 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 ARRB2P32121 409 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 CEACAM7Q14002 265 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 OR7A5Q15622 319 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 MST1LQ2TV78 715 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 HIKESHIQ53FT3 197 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 TMEM225Q6GV28 225 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 LRRC74BQ6ZQY2 392 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 IL17RELQ6ZVW7 336 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 SPATA19Q7Z5L4 167 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 NUDCD3Q8IVD9 361 aa13.51□□□□□ -0.25
NEDD1-207ENST00000555114 AURKBQ96GD4 344 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms