RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 NXF2Q9GZY0 626 aaKnown RBP8.09□□□□□ -1.11
TDP1-210ENST00000554976 NDUFB11Q9NX14 153 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 HAO2Q9NYQ3 351 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 MYOTQ9UBF9 498 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 LOXL2Q9Y4K0 774 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 NCKAP5O14513 1909 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 TMEM72A0PK05 275 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 ARPC3O15145 178 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 PPP1R3DO95685 299 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 TXNDC12O95881 172 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 TACR3P29371 465 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 NOS3P29474 1203 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 VBP1P61758 197 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 MLLT11Q13015 90 aaPredicted RBP8.09□□□□□ -1.11
TDP1-210ENST00000554976 ARMCX4Q5H9R4 360 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 HLA-DQA1Q5Y7H0 255 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 DCDC5Q6ZRR9 648 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 MEPCEQ7L2J0 689 aaKnown RBP8.09□□□□□ -1.11
TDP1-210ENST00000554976 VASH1Q7L8A9 365 aaPredicted RBP8.09□□□□□ -1.11
TDP1-210ENST00000554976 OAFQ86UD1 273 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 CPOQ8IVL8 374 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 MISPQ8IVT2 679 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 SLC37A3Q8NCC5 494 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 GALNT6Q8NCL4 622 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 OR5M3Q8NGP4 307 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 M1APQ8TC57 530 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 TAAR8Q969N4 342 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 KTI12Q96EK9 354 aaPredicted RBP8.09□□□□□ -1.11
TDP1-210ENST00000554976 LPAR4Q99677 370 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 SLC39A1Q9NY26 324 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 RPS6KB2Q9UBS0 482 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 C19orf25Q9UFG5 118 aaPredicted RBP8.09□□□□□ -1.11
TDP1-210ENST00000554976 PTPRBP23467 1997 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 WDR87Q6ZQQ6 2873 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 LOC105371267A0A1B0GV96 52 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 IRGMA1A4Y4 181 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 ANKRD34BA5PLL1 514 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 FAM86C2PA6NEL3 165 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 ANKUB1A6NFN9 424 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 C9orf172C9J069 976 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 PLD2O14939 933 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 CELA2AP08217 269 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 RAB40ALP0C0E4 278 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 OCM2P0CE71 109 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 OCMP0CE72 109 aaPredicted RBP8.08□□□□□ -1.12
TDP1-210ENST00000554976 PEPDP12955 493 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 CPEP16870 476 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 NR4A1P22736 598 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 CRYBB2P43320 205 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 EIF2B2P49770 351 aaKnown RBP8.08□□□□□ -1.12
TDP1-210ENST00000554976 CDH11P55287 796 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 NCS1P62166 190 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 CBFBQ13951 182 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 ARMC4Q5T2S8 1044 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 DPY19L2P2Q6ZN68 376 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 RTL4Q6ZR62 310 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 ADGRG3Q86Y34 549 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 GID4Q8IVV7 300 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 SLC15A4Q8N697 577 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 OR52L1Q8NGH7 329 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 ZNRF4Q8WWF5 429 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 METTL21AQ8WXB1 218 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 TTC9Q92623 222 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 TRMT61AQ96FX7 289 aaKnown RBP8.08□□□□□ -1.12
TDP1-210ENST00000554976 MGLLQ99685 303 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 ARHGAP9Q9BRR9 750 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 SLIRPQ9GZT3 109 aaKnown RBP8.08□□□□□ -1.12
TDP1-210ENST00000554976 MED20Q9H944 212 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 ADGRL4Q9HBW9 690 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 PARD6AQ9NPB6 346 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 PCDHGB6Q9Y5F9 930 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 ZC3H12DA2A288 527 aaKnown RBP8.08□□□□□ -1.12
TDP1-210ENST00000554976 FAM183AA6NL82 134 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 NDUFB2O95178 105 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 SAGP10523 405 aaPredicted RBP8.08□□□□□ -1.12
TDP1-210ENST00000554976 SLC6A6P31641 620 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 SUMO3P55854 103 aaPredicted RBP8.08□□□□□ -1.12
TDP1-210ENST00000554976 CLDN6P56747 220 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 DBPQ10586 325 aaPredicted RBP8.08□□□□□ -1.12
TDP1-210ENST00000554976 PLBD1Q6P4A8 553 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 GLRX5Q86SX6 157 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 CDK20Q8IZL9 346 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 CYP4Z2PQ8N1L4 340 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 NPEPL1Q8NDH3 523 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 OR51A7Q8NH64 312 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 MOSPD2Q8NHP6 518 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 ZPLD1Q8TCW7 415 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 RASL10BQ96S79 203 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 DCUN1D5Q9BTE7 237 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 PROK2Q9HC23 129 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 WARS2Q9UGM6 360 aaKnown RBP8.08□□□□□ -1.12
TDP1-210ENST00000554976 ZNF229Q9UJW7 825 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 EXOSC1Q9Y3B2 195 aaKnown RBP8.08□□□□□ -1.12
TDP1-210ENST00000554976 CHCHD2Q9Y6H1 151 aaPredicted RBP8.08□□□□□ -1.12
TDP1-210ENST00000554976 CFAP54Q96N23 3096 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 FTCDNL1E5RQL4 147 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 IMPA2O14732 288 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 GNB5O14775 395 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 GPX5O75715 221 aa8.08□□□□□ -1.12
TDP1-210ENST00000554976 LALBAP00709 142 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms