RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 FAM71CQ8NEG0 241 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ZNF397Q8NF99 534 aaPredicted RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 OR56B1Q8NGI3 324 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 WDR36Q8NI36 951 aaKnown RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 FLVCR1-AS1Q8TAF5 88 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 DQX1Q8TE96 717 aaKnown RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 UBE2Q2Q8WVN8 375 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ITLN1Q8WWA0 313 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 FCGR1BQ92637 280 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 KLK6Q92876 244 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 RAB3CQ96E17 227 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 MSANTD3Q96H12 275 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TSPAN18Q96SJ8 248 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 KCNK16Q96T55 309 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 SMR3AQ99954 134 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 FAM173AQ9BQD7 235 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TTYH2Q9BSA4 534 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 APOOQ9BUR5 198 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 BBS2Q9BXC9 721 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 SPZ1Q9BXG8 430 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CALN1Q9BXU9 219 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 NMNAT2Q9BZQ4 307 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 RAB17Q9H0T7 212 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 RDH14Q9HBH5 336 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ADGRL4Q9HBW9 690 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TM9SF3Q9HD45 589 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ASCL3Q9NQ33 180 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 STARD5Q9NSY2 213 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 SOHLH2Q9NX45 425 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 RCOR3Q9P2K3 495 aaPredicted RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 PISDQ9UG56 409 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 MLXQ9UH92 298 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 SH3BGRL2Q9UJC5 107 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 PURGQ9UJV8 347 aaKnown RBP1.19□□□□□ -2.22
PRPF39-208ENST00000554785 DDX19BQ9UMR2 479 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TP53TG5Q9Y2B4 290 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 FKBP7Q9Y680 259 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 CLCA3PQ9Y6N3 262 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 TGP01266 2768 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 NID2Q14112 1375 aa1.19□□□□□ -2.22
PRPF39-208ENST00000554785 ANKRD36A6QL64 1941 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 TTC41PQ6P2S7 1318 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 CCDC88CQ9P219 2028 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 NOTCH1P46531 2555 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 TRAV19A0A0A6YYK7 116 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 IGKV6-21A0A0C4DH24 114 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 A0A1B0GUA9 196 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 ESYT2A0FGR8 921 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 EFCAB7A8K855 629 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 SRRM5B3KS81 715 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 TCP11X1B4DZS4 312 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 E9PAM4 449 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 PDLIM1O00151 329 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 LRRTM2O43300 516 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 TYROBPO43914 113 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 PTBP3O95758 552 aaKnown RBP1.18□□□□□ -2.22
PRPF39-208ENST00000554785 IGHG3P01860 377 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 SNRPCP09234 159 aaKnown RBP1.18□□□□□ -2.22
PRPF39-208ENST00000554785 FAM200BP0CF97 657 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 FOLR2P14207 255 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 CYP11B1P15538 503 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 GATA2P23769 480 aaPredicted RBP1.18□□□□□ -2.22
PRPF39-208ENST00000554785 PTPN4P29074 926 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 HNRNPH3P31942 346 aaKnown RBP1.18□□□□□ -2.22
PRPF39-208ENST00000554785 CHRNA3P32297 505 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 CAMLGP49069 296 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 RPL34P49207 117 aaKnown RBP1.18□□□□□ -2.22
PRPF39-208ENST00000554785 ARRB1P49407 418 aaPredicted RBP1.18□□□□□ -2.22
PRPF39-208ENST00000554785 METAP1P53582 386 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 UCNP55089 124 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 BPIFB3P59826 476 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 GMFBP60983 142 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 HERVK_113P63132 956 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 ERVK-8P63133 956 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 NOP14P78316 857 aaKnown RBP1.18□□□□□ -2.22
PRPF39-208ENST00000554785 NAAAQ02083 359 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 SRYQ05066 204 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 TFDP1Q14186 410 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 CRMP1Q14194 572 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 PDGFRLQ15198 375 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 INAQ16352 499 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 PARP6Q2NL67 630 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 DEFB133Q30KQ1 61 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 ACSF3Q4G176 576 aaPredicted RBP1.18□□□□□ -2.22
PRPF39-208ENST00000554785 HIGD2BQ4VC39 106 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 TCTEX1D4Q5JR98 221 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 ACER2Q5QJU3 275 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 LDLRAP1Q5SW96 308 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 LCE1CQ5T751 118 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 LCE1BQ5T7P3 118 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 RAET1GQ6H3X3 334 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 IRGCQ6NXR0 463 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 GUSBP11Q6P575 273 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 ISLR2Q6UXK2 745 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 TMEM135Q86UB9 458 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 VPS36Q86VN1 386 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 TMEM25Q86YD3 366 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 HIPK1Q86Z02 1210 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 ZBTB8OSQ8IWT0 167 aa1.18□□□□□ -2.22
PRPF39-208ENST00000554785 CENPSQ8N2Z9 138 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms