RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 HCFC1R1Q9NWW0 138 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 GFOD1Q9NXC2 390 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 GDE1Q9NZC3 331 aa13.01□□□□□ -0.33
VTI1B-204ENST00000554659 FBXO24O75426 580 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 PIGAP37287 484 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 ADPRMQ3LIE5 342 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 NIPAL3Q6P499 406 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 SFXN4Q6P4A7 337 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 BPIFB2Q8N4F0 458 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 OR14L1PQ8NHC6 308 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 OR10A5Q9H207 317 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 OR10A2Q9H208 303 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 SLC38A1Q9H2H9 487 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 MOKQ9UQ07 419 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 MPPED1O15442 326 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 IRF2P14316 349 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 GDNFP39905 211 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 XCR1P46094 333 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 DSC1Q08554 894 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 ZFAND1Q8TCF1 268 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 OR5M11Q96RB7 305 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 ELOVL3Q9HB03 270 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 SEMA4GQ9NTN9 838 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 F5H5K5 113 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 CEBPBP17676 345 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 SLC14A1Q13336 389 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 SLX4IPQ5VYV7 408 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 KIAA0895LQ68EN5 471 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 ALKAL2Q6UX46 152 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 BADQ92934 168 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 NXF5Q9H1B4 397 aaKnown RBP13□□□□□ -0.33
VTI1B-204ENST00000554659 MYO10Q9HD67 2058 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 TEX51A0A1B0GUA7 166 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 SNRPBP14678 240 aaKnown RBP13□□□□□ -0.33
VTI1B-204ENST00000554659 PCSK6P29122 969 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 PRKAR1BP31321 381 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 SIRPAP78324 504 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 Q6ZSR6 202 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 ABHD12BQ7Z5M8 362 aaPredicted RBP13□□□□□ -0.33
VTI1B-204ENST00000554659 GCDHQ92947 438 aaPredicted RBP13□□□□□ -0.33
VTI1B-204ENST00000554659 ANKRD19PQ9H560 264 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 TAS2R16Q9NYV7 291 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 KIF25Q9UIL4 384 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 OSGIN1Q9UJX0 560 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 NUP98P52948 1817 aa13□□□□□ -0.33
VTI1B-204ENST00000554659 TMEM269A0A1B0GVZ9 245 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 PRSS38A1L453 326 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 TMEM212A6NML5 194 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 E9PI62 339 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 CD53P19397 219 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 HTR1FP30939 366 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 RPL23AP62750 156 aaKnown RBP12.99□□□□□ -0.33
VTI1B-204ENST00000554659 TNFRSF17Q02223 184 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 ACTBL2Q562R1 376 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 CELF2-AS1Q8N7Q2 184 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 TUBB1Q9H4B7 451 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 SLC6A20Q9NP91 592 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 KRBOX1C9JBD0 128 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 FADS1O60427 444 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 ADAM23O75077 832 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 MED6O75586 246 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 HOXB5P09067 269 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 PKLRP30613 574 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 SFTPDP35247 375 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 IDUAP35475 653 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 LIPAP38571 399 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 FOXK1P85037 733 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 SORDQ00796 357 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 OPCMLQ14982 345 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 CLVS2Q5SYC1 327 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 NLGN4YQ8NFZ3 816 aaPredicted RBP12.99□□□□□ -0.33
VTI1B-204ENST00000554659 NIPSNAP1Q9BPW8 284 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 IGLV3-10A0A075B6K4 115 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 TRDV1A0A1B0GX56 115 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 TAPBPO15533 448 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 NUDT21O43809 227 aaKnown RBP12.99□□□□□ -0.33
VTI1B-204ENST00000554659 M6PRP20645 277 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 DRD1P21728 446 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 PTBP1P26599 531 aaKnown RBP eCLIP12.99□□□□□ -0.33
VTI1B-204ENST00000554659 TGM4P49221 684 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 UBE2NP61088 152 aaKnown RBP12.99□□□□□ -0.33
VTI1B-204ENST00000554659 DCAF7P61962 342 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 SNRPGP62308 76 aaKnown RBP12.99□□□□□ -0.33
VTI1B-204ENST00000554659 SPOCK1Q08629 439 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 PAPD4Q6PIY7 484 aaKnown RBP12.99□□□□□ -0.33
VTI1B-204ENST00000554659 RADILQ96JH8 1075 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 CNTNAP3Q9BZ76 1288 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 C11orf54Q9H0W9 315 aaPredicted RBP12.99□□□□□ -0.33
VTI1B-204ENST00000554659 CHRDQ9H2X0 955 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 CXorf36Q9H7Y0 433 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 LUZP4Q9P127 313 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 VDAC3Q9Y277 283 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 FBXO7Q9Y3I1 522 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 SNX11Q9Y5W9 270 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 TMEM82A0PJX8 343 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 YY2O15391 372 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 CLN5O75503 358 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 SCGB1D1O95968 90 aa12.99□□□□□ -0.33
VTI1B-204ENST00000554659 SEC61A1P61619 476 aaKnown RBP12.99□□□□□ -0.33
VTI1B-204ENST00000554659 LIX1LQ8IVB5 337 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms