RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 ACTA1P68133 377 aa14.4□□□□□ -0.1
ARHGEF40-203ENST00000554514 FCN2Q15485 313 aa14.4□□□□□ -0.1
ARHGEF40-203ENST00000554514 DEFB119Q8N690 84 aa14.4□□□□□ -0.1
ARHGEF40-203ENST00000554514 ZNF433Q8N7K0 673 aaPredicted RBP14.4□□□□□ -0.1
ARHGEF40-203ENST00000554514 DEDD2Q8WXF8 326 aa14.4□□□□□ -0.1
ARHGEF40-203ENST00000554514 HSPA12BQ96MM6 686 aa14.4□□□□□ -0.1
ARHGEF40-203ENST00000554514 SLA2Q9H6Q3 261 aa14.4□□□□□ -0.1
ARHGEF40-203ENST00000554514 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.4□□□□□ -0.1
ARHGEF40-203ENST00000554514 TEKT2Q9UIF3 430 aa14.4□□□□□ -0.1
ARHGEF40-203ENST00000554514 A0A087WV48 116 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 SCO2O43819 266 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 ERP29P30040 261 aaKnown RBP14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 GZMKP49863 264 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 CCR6P51684 374 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 MAB21L1Q13394 359 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 ULK3Q6PHR2 472 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 MCATQ8IVS2 390 aaKnown RBP14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 TIGD4Q8IY51 512 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 TOMM5Q8N4H5 51 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 GPBAR1Q8TDU6 330 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 CREB3L1Q96BA8 519 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 DGAT2Q96PD7 388 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 CHRNA9Q9UGM1 479 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 FBXL21Q9UKT6 434 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 SDK1Q7Z5N4 2213 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 FLRT2O43155 660 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 RPP14O95059 124 aaKnown RBP14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 THEGLP0DJG4 465 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 GIFP27352 417 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 HTR2BP41595 481 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 EIF2B5Q13144 721 aaKnown RBP14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 PON3Q15166 354 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 HES5Q5TA89 166 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 PXKQ7Z7A4 578 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 BMPERQ8N8U9 685 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 ZFAND1Q8TCF1 268 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 HSD17B8Q92506 261 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 TSSK2Q96PF2 358 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 DERL3Q96Q80 235 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 UBL7Q96S82 380 aaPredicted RBP14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 Q9N2J8 555 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 CD207Q9UJ71 328 aa14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 TP53BP1Q12888 1972 aaPredicted RBP14.39□□□□□ -0.11
ARHGEF40-203ENST00000554514 ACOD1A6NK06 481 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 YPEL5P62699 121 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 GALK2Q01415 458 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 CDK5R1Q15078 307 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 TRAM1Q15629 374 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 TPRA1Q86W33 373 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 SIAH3Q8IW03 269 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 BEST4Q8NFU0 473 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 ZDHHC1Q8WTX9 485 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 KCTD12Q96CX2 325 aaKnown RBP14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 MRPL38Q96DV4 380 aaKnown RBP14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 VSTM2LQ96N03 204 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 MED28Q9H204 178 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 PRTFDC1Q9NRG1 225 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 BAIAP2Q9UQB8 552 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 MPDZO75970 2070 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 CACNA1CQ13936 2221 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 OR6C68A6NDL8 312 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 A8MUA0 341 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 OR2B3O76000 313 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 MT-ND4P03905 459 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 MAOBP27338 520 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 BTCP35070 178 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 SIRPAP78324 504 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 PLA1AQ53H76 456 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 SMUG1Q53HV7 270 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 PYHIN1Q6K0P9 492 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 LYPD8Q6UX82 237 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 SERPINA12Q8IW75 414 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 MS4A15Q8N5U1 240 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 C19orf47Q8N9M1 422 aaKnown RBP14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 MOSPD2Q8NHP6 518 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 C16orf52Q8NHV5 167 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 MMABQ96EY8 250 aaPredicted RBP14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 NKIRAS2Q9NYR9 191 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 C1QBP02746 253 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 RNH1P13489 461 aaKnown RBP14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 HOXD11P31277 338 aaPredicted RBP14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 CLDN12P56749 244 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 HTR4Q13639 388 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 THOC7Q6I9Y2 204 aaKnown RBP14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 ZNF550Q7Z398 422 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 FAM160A2Q8N612 972 aaPredicted RBP14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 LGALS14Q8TCE9 139 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 RLN3Q8WXF3 142 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 SMIM19Q96E16 107 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 CITED4Q96RK1 184 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 MAP3K3Q99759 626 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 ZNF426Q9BUY5 554 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 SEMA6CQ9H3T2 930 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 AUNIPQ9H7T9 357 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 PRDM9Q9NQV7 894 aa14.38□□□□□ -0.11
ARHGEF40-203ENST00000554514 ANKRD61A6NGH8 418 aa14.37□□□□□ -0.11
ARHGEF40-203ENST00000554514 FABP7O15540 132 aa14.37□□□□□ -0.11
ARHGEF40-203ENST00000554514 ZNF780AO75290 641 aaPredicted RBP14.37□□□□□ -0.11
ARHGEF40-203ENST00000554514 SC5DO75845 299 aa14.37□□□□□ -0.11
ARHGEF40-203ENST00000554514 IGHV4-34P06331 123 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms