RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ADPRMQ3LIE5 342 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 C14orf28Q4W4Y0 310 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 C5orf47Q569G3 176 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 XKR7Q5GH72 579 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 TPRG1LQ5T0D9 272 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 FAM69BQ5VUD6 431 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 FAM219BQ5XKK7 198 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 PLAG1Q6DJT9 500 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 REEP3Q6NUK4 255 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 WDR74Q6RFH5 385 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 NPSR1Q6W5P4 371 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 DEF8Q6ZN54 512 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 FAM183BPQ6ZVS7 135 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 STRADAQ7RTN6 431 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 UBE3DQ7Z6J8 389 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 NRMQ8IXM6 262 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 MICU2Q8IYU8 434 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 GCNT2Q8N0V5 402 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 DEFB106AQ8N104 65 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CFAP52Q8N1V2 620 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 UMODL1-AS1Q8N2C9 162 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 PQLC3Q8N755 202 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 BMPERQ8N8U9 685 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 PLA2G15Q8NCC3 412 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 FBXO36Q8NEA4 188 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 SDR9C7Q8NEX9 313 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 OR2AP1Q8NGE2 309 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 OR13C5Q8NGS8 318 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 MARCH1Q8TCQ1 289 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 RIT1Q92963 219 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 NSL1Q96IY1 281 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 SLC45A3Q96JT2 553 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 SFXN2Q96NB2 322 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 GFM1Q96RP9 751 aaKnown RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 MDFIQ99750 246 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 EBNA1BP2Q99848 306 aaKnown RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 ERVK-6Q9BXR3 956 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 BHLHE41Q9C0J9 482 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 MS4A7Q9GZW8 240 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 SLC38A1Q9H2H9 487 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 FBXO8Q9NRD0 319 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 FBXO6Q9NRD1 293 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 SDHAF2Q9NX18 166 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 TEX10Q9NXF1 929 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 HCN3Q9P1Z3 774 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 COPS7AQ9UBW8 275 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 SCOCQ9UIL1 159 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 ACSL5Q9ULC5 683 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 ICKQ9UPZ9 632 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 LOXL2Q9Y4K0 774 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 BPTFQ12830 3046 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 TCRBV5S1A1TA0A578 114 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM89A2RUT3 159 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 ANKRD30BLA7E2S9 258 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 TEX22C9J3V5 150 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 H3BMM5 538 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 H3BN98 237 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 GSTA4O15217 222 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 ITGA10O75578 1167 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 SRP72O76094 671 aaKnown RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 TNFP01375 233 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 IGLV1-40P01703 118 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CRHP06850 196 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 H2AFZP0C0S5 128 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 SBK3P0C264 359 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 NR2F6P10588 404 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 HLA-GP17693 338 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 MTNR1AP48039 350 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 RPL14P50914 215 aaKnown RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CCNG1P51959 295 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 LIMK2P53671 638 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM33P57088 247 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 NCALDP61601 193 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 AP1S1P61966 158 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 ESRRGP62508 458 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 RPL23AP62750 156 aaKnown RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 PITX1P78337 314 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 TXNL4AP83876 142 aaKnown RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 MC2RQ01718 297 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 TNFRSF9Q07011 255 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 DPTQ07507 201 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 LY6DQ14210 128 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 TRIP10Q15642 601 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 SLC1A5Q15758 541 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 TOMM34Q15785 309 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 NDUFA9Q16795 377 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 PARP15Q460N3 678 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CHRFAM7AQ494W8 412 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 PHF19Q5T6S3 580 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 DDI2Q5TDH0 399 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 DLEU7Q6UYE1 221 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 GDPD4Q6W3E5 623 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 H2AFVQ71UI9 128 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CBLL1Q75N03 491 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 MRPL21Q7Z2W9 205 aaKnown RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 PTAR1Q7Z6K3 402 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 LHFPL3Q86UP9 236 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 SHISA5Q8N114 240 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 DTWD1Q8N5C7 304 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM156Q8N614 296 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms