RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 PIANPQ8IYJ0 282 aa8.83□□□□□ -1
SIX4-202ENST00000554079 CDK20Q8IZL9 346 aa8.83□□□□□ -1
SIX4-202ENST00000554079 LGALS14Q8TCE9 139 aa8.83□□□□□ -1
SIX4-202ENST00000554079 ING5Q8WYH8 240 aa8.83□□□□□ -1
SIX4-202ENST00000554079 SLC25A38Q96DW6 304 aa8.83□□□□□ -1
SIX4-202ENST00000554079 MYEOVQ96EZ4 313 aa8.83□□□□□ -1
SIX4-202ENST00000554079 NOL4LQ96MY1 436 aaPredicted RBP8.83□□□□□ -1
SIX4-202ENST00000554079 YPEL4Q96NS1 127 aa8.83□□□□□ -1
SIX4-202ENST00000554079 KLHL5Q96PQ7 755 aa8.83□□□□□ -1
SIX4-202ENST00000554079 CCNL2Q96S94 520 aaPredicted RBP8.83□□□□□ -1
SIX4-202ENST00000554079 MRIQ9BWK5 157 aa8.83□□□□□ -1
SIX4-202ENST00000554079 PLA2G12AQ9BZM1 189 aa8.83□□□□□ -1
SIX4-202ENST00000554079 FBXO44Q9H4M3 255 aa8.83□□□□□ -1
SIX4-202ENST00000554079 IL21RQ9HBE5 538 aa8.83□□□□□ -1
SIX4-202ENST00000554079 TMEM161AQ9NX61 479 aa8.83□□□□□ -1
SIX4-202ENST00000554079 F8VVB4 439 aa8.82□□□□□ -1
SIX4-202ENST00000554079 F8VWA3 439 aa8.82□□□□□ -1
SIX4-202ENST00000554079 RNASEK-C17orf49H0YIS7 233 aa8.82□□□□□ -1
SIX4-202ENST00000554079 GJB3O75712 270 aa8.82□□□□□ -1
SIX4-202ENST00000554079 EPHX1P07099 455 aa8.82□□□□□ -1
SIX4-202ENST00000554079 H1F0P07305 194 aaKnown RBP8.82□□□□□ -1
SIX4-202ENST00000554079 FAM157CP0CG43 387 aa8.82□□□□□ -1
SIX4-202ENST00000554079 ARAFP10398 606 aa8.82□□□□□ -1
SIX4-202ENST00000554079 RAC2P15153 192 aa8.82□□□□□ -1
SIX4-202ENST00000554079 BMP7P18075 431 aa8.82□□□□□ -1
SIX4-202ENST00000554079 MMP11P24347 488 aa8.82□□□□□ -1
SIX4-202ENST00000554079 GSK3AP49840 483 aa8.82□□□□□ -1
SIX4-202ENST00000554079 RENBPP51606 427 aa8.82□□□□□ -1
SIX4-202ENST00000554079 CDH11P55287 796 aa8.82□□□□□ -1
SIX4-202ENST00000554079 SLBPQ14493 270 aaKnown RBP eCLIP8.82□□□□□ -1
SIX4-202ENST00000554079 AWAT1Q58HT5 328 aa8.82□□□□□ -1
SIX4-202ENST00000554079 FBXO47Q5MNV8 452 aa8.82□□□□□ -1
SIX4-202ENST00000554079 C11orf87Q6NUJ2 197 aa8.82□□□□□ -1
SIX4-202ENST00000554079 C11orf88Q6PI97 169 aa8.82□□□□□ -1
SIX4-202ENST00000554079 CEACAM19Q7Z692 300 aa8.82□□□□□ -1
SIX4-202ENST00000554079 DNAJB7Q7Z6W7 309 aaPredicted RBP8.82□□□□□ -1
SIX4-202ENST00000554079 COMTD1Q86VU5 262 aa8.82□□□□□ -1
SIX4-202ENST00000554079 VRK3Q8IV63 474 aa8.82□□□□□ -1
SIX4-202ENST00000554079 MTMR14Q8NCE2 650 aa8.82□□□□□ -1
SIX4-202ENST00000554079 SLC30A7Q8NEW0 376 aa8.82□□□□□ -1
SIX4-202ENST00000554079 OR52N2Q8NGI0 321 aa8.82□□□□□ -1
SIX4-202ENST00000554079 GPA33Q99795 319 aa8.82□□□□□ -1
SIX4-202ENST00000554079 TMEM208Q9BTX3 173 aa8.82□□□□□ -1
SIX4-202ENST00000554079 DDA1Q9BW61 102 aa8.82□□□□□ -1
SIX4-202ENST00000554079 RSPO3Q9BXY4 272 aaPredicted RBP8.82□□□□□ -1
SIX4-202ENST00000554079 ADAM19Q9H013 955 aa8.82□□□□□ -1
SIX4-202ENST00000554079 OR51B6Q9H340 312 aa8.82□□□□□ -1
SIX4-202ENST00000554079 EPHX3Q9H6B9 360 aa8.82□□□□□ -1
SIX4-202ENST00000554079 FKRPQ9H9S5 495 aa8.82□□□□□ -1
SIX4-202ENST00000554079 DOK5Q9P104 306 aa8.82□□□□□ -1
SIX4-202ENST00000554079 ZNF282Q9UDV7 671 aaPredicted RBP8.82□□□□□ -1
SIX4-202ENST00000554079 RUVBL1Q9Y265 456 aaKnown RBP8.82□□□□□ -1
SIX4-202ENST00000554079 A0A1B0GTI1 187 aa8.81□□□□□ -1
SIX4-202ENST00000554079 CPED1A4D0V7 1026 aa8.81□□□□□ -1
SIX4-202ENST00000554079 C7orf77A4D0Y5 90 aa8.81□□□□□ -1
SIX4-202ENST00000554079 MOXD2PA6NHM9 499 aa8.81□□□□□ -1
SIX4-202ENST00000554079 ACOD1A6NK06 481 aa8.81□□□□□ -1
SIX4-202ENST00000554079 FAM183AA6NL82 134 aa8.81□□□□□ -1
SIX4-202ENST00000554079 IQCF5A8MTL0 148 aa8.81□□□□□ -1
SIX4-202ENST00000554079 J3QRE1 110 aa8.81□□□□□ -1
SIX4-202ENST00000554079 ADAM10O14672 748 aa8.81□□□□□ -1
SIX4-202ENST00000554079 SOX15O60248 233 aa8.81□□□□□ -1
SIX4-202ENST00000554079 THBS1P07996 1170 aa8.81□□□□□ -1
SIX4-202ENST00000554079 AHRP35869 848 aa8.81□□□□□ -1
SIX4-202ENST00000554079 CCL23P55773 120 aa8.81□□□□□ -1
SIX4-202ENST00000554079 NDUFA6P56556 154 aa8.81□□□□□ -1
SIX4-202ENST00000554079 CACNG1Q06432 222 aa8.81□□□□□ -1
SIX4-202ENST00000554079 TOMM34Q15785 309 aaPredicted RBP8.81□□□□□ -1
SIX4-202ENST00000554079 DOK7Q18PE1 504 aa8.81□□□□□ -1
SIX4-202ENST00000554079 KHDC3LQ587J8 217 aa8.81□□□□□ -1
SIX4-202ENST00000554079 MESTQ5EB52 335 aa8.81□□□□□ -1
SIX4-202ENST00000554079 ZDHHC20Q5W0Z9 365 aa8.81□□□□□ -1
SIX4-202ENST00000554079 TCTN3Q6NUS6 607 aa8.81□□□□□ -1
SIX4-202ENST00000554079 FAM199XQ6PEV8 388 aaPredicted RBP8.81□□□□□ -1
SIX4-202ENST00000554079 DHRS11Q6UWP2 260 aa8.81□□□□□ -1
SIX4-202ENST00000554079 DRAM2Q6UX65 266 aa8.81□□□□□ -1
SIX4-202ENST00000554079 RABEPKQ7Z6M1 372 aa8.81□□□□□ -1
SIX4-202ENST00000554079 FJX1Q86VR8 437 aa8.81□□□□□ -1
SIX4-202ENST00000554079 HIST3H2BBQ8N257 126 aa8.81□□□□□ -1
SIX4-202ENST00000554079 PAQR4Q8N4S7 273 aaPredicted RBP8.81□□□□□ -1
SIX4-202ENST00000554079 FAM24BQ8N5W8 94 aa8.81□□□□□ -1
SIX4-202ENST00000554079 TEX26Q8N6G2 289 aa8.81□□□□□ -1
SIX4-202ENST00000554079 TEX19Q8NA77 164 aa8.81□□□□□ -1
SIX4-202ENST00000554079 B3GALNT2Q8NCR0 500 aa8.81□□□□□ -1
SIX4-202ENST00000554079 GPR32P1Q8NGA4 272 aa8.81□□□□□ -1
SIX4-202ENST00000554079 OR10AD1Q8NGE0 317 aa8.81□□□□□ -1
SIX4-202ENST00000554079 SLC7A13Q8TCU3 470 aa8.81□□□□□ -1
SIX4-202ENST00000554079 RNF141Q8WVD5 230 aa8.81□□□□□ -1
SIX4-202ENST00000554079 TNFAIP8L1Q8WVP5 186 aa8.81□□□□□ -1
SIX4-202ENST00000554079 LINC01599Q8WXQ3 324 aa8.81□□□□□ -1
SIX4-202ENST00000554079 PPCDCQ96CD2 204 aa8.81□□□□□ -1
SIX4-202ENST00000554079 SMARCD1Q96GM5 515 aa8.81□□□□□ -1
SIX4-202ENST00000554079 WRAP53Q9BUR4 548 aaKnown RBP8.81□□□□□ -1
SIX4-202ENST00000554079 SNHG12Q9BXW3 62 aa8.81□□□□□ -1
SIX4-202ENST00000554079 SLC27A6Q9Y2P4 619 aa8.81□□□□□ -1
SIX4-202ENST00000554079 SERTM1A2A2V5 107 aa8.81□□□□□ -1
SIX4-202ENST00000554079 OR5H14A6NHG9 310 aa8.81□□□□□ -1
SIX4-202ENST00000554079 OR2AT4A6NND4 320 aa8.81□□□□□ -1
SIX4-202ENST00000554079 F5H0A9 414 aaPredicted RBP8.81□□□□□ -1
SIX4-202ENST00000554079 LDLRAD4O15165 306 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms