RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 KERAO60938 352 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 SUPT3HO75486 399 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 LYZL6O75951 148 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 SEC31AO94979 1220 aaKnown RBP2.74□□□□□ -1.97
SLIRP-202ENST00000553981 TTC4O95801 387 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 ADAP00813 363 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 C2P06681 752 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 CRHP06850 196 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 IL3P08700 152 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 PEPDP12955 493 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 COX7A2P14406 83 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 PSMB1P20618 241 aaKnown RBP2.74□□□□□ -1.97
SLIRP-202ENST00000553981 IGHV1-2P23083 117 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 PIK3R1P27986 724 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 ARRB2P32121 409 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 EVI2BP34910 448 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 IDUAP35475 653 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 PIK3CBP42338 1070 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 FNTAP49354 379 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 DIO3P55073 304 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 FOXA1P55317 472 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 DSCR4P56555 118 aaPredicted RBP2.74□□□□□ -1.97
SLIRP-202ENST00000553981 TXNL4AP83876 142 aaKnown RBP2.74□□□□□ -1.97
SLIRP-202ENST00000553981 GUCY2DQ02846 1103 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 CUL3Q13618 768 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 FHL3Q13643 280 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 GTF2H2Q13888 395 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 CD226Q15762 336 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 PFKFB4Q16877 469 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 NDUFAF6Q330K2 333 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 GRAMD1BQ3KR37 738 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 ODF3L2Q3SX64 289 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 SGO1Q5FBB7 561 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 CDKL4Q5MAI5 379 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 FAM120AOSQ5T036 256 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.74□□□□□ -1.97
SLIRP-202ENST00000553981 LGSNQ5TDP6 509 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 RAET1LQ5VY80 246 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 LIPJQ5W064 366 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 OR52E8Q6IFG1 317 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 GTF2H2CQ6P1K8 395 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 CBLN3Q6UW01 205 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 FRA10AC1Q70Z53 315 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 COMMD6Q7Z4G1 85 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 P4HA3Q7Z4N8 544 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 MYPOPQ86VE0 399 aaPredicted RBP2.74□□□□□ -1.97
SLIRP-202ENST00000553981 CARM1Q86X55 608 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 SLC44A2Q8IWA5 706 aaPredicted RBP2.74□□□□□ -1.97
SLIRP-202ENST00000553981 KLHL7Q8IXQ5 586 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 DND1Q8IYX4 353 aaKnown RBP2.74□□□□□ -1.97
SLIRP-202ENST00000553981 WDR31Q8NA23 367 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 GATSQ8NAP1 163 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 ZNF527Q8NB42 609 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 OR7G1Q8NGA0 311 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 OR4F6Q8NGB9 312 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 OR6K3Q8NGY3 331 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 OR4C3Q8NH37 302 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 ZNF675Q8TD23 568 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 ACTRT1Q8TDG2 376 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 BCAS4Q8TDM0 211 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 PIK3R3Q92569 461 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 DNAJA3Q96EY1 480 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 GIMAP5Q96F15 307 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 LRRC46Q96FV0 321 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 OTUB1Q96FW1 271 aaPredicted RBP2.74□□□□□ -1.97
SLIRP-202ENST00000553981 EGLN2Q96KS0 407 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 COL21A1Q96P44 957 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 ANP32EQ9BTT0 268 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 CACNG6Q9BXT2 260 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 TRIM31Q9BZY9 425 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 ROGDIQ9GZN7 287 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 GLIPR2Q9H4G4 154 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 NOL11Q9H8H0 719 aaKnown RBP2.74□□□□□ -1.97
SLIRP-202ENST00000553981 POPDC3Q9HBV1 291 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 EML4Q9HC35 981 aaKnown RBP2.74□□□□□ -1.97
SLIRP-202ENST00000553981 DECR2Q9NUI1 292 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 TMEM160Q9NX00 188 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 MS4A12Q9NXJ0 267 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 ZNF226Q9NYT6 803 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 NUDT4Q9NZJ9 180 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 CD274Q9NZQ7 290 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 SELENONQ9NZV5 590 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 MSRB1Q9NZV6 116 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 OPTCQ9UBM4 332 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 PRODH2Q9UF12 536 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 STEAP1Q9UHE8 339 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 PHF11Q9UIL8 331 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 DKKL1Q9UK85 242 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 PCTPQ9UKL6 214 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 RNF115Q9Y4L5 304 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 KCNE3Q9Y6H6 103 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 COL6A5A8TX70 2615 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 ARHGAP32A7KAX9 2087 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.73□□□□□ -1.974e-15■■■■■ 30.4
SLIRP-202ENST00000553981 TRBV5-3A0A0A0MS03 114 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 A0A0G2JK05 382 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 A0A1W2PRB8 838 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 TMEM129A0AVI4 362 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 CCDC189A1A4V9 331 aa2.73□□□□□ -1.97
SLIRP-202ENST00000553981 C1orf226A1L170 272 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms