RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 TYW3Q6IPR3 259 aaKnown RBP8.7□□□□□ -1.02
ACTN1-210ENST00000553779 FAM166AQ6J272 317 aa8.7□□□□□ -1.02
ACTN1-210ENST00000553779 EMBQ6PCB8 327 aa8.7□□□□□ -1.02
ACTN1-210ENST00000553779 B3GLCTQ6Y288 498 aa8.7□□□□□ -1.02
ACTN1-210ENST00000553779 AAED1Q7RTV5 226 aa8.7□□□□□ -1.02
ACTN1-210ENST00000553779 RIMKLAQ8IXN7 391 aa8.7□□□□□ -1.02
ACTN1-210ENST00000553779 C17orf78Q8N4C9 275 aa8.7□□□□□ -1.02
ACTN1-210ENST00000553779 C1orf162Q8NEQ5 155 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-210ENST00000553779 PMM1Q92871 262 aa8.7□□□□□ -1.02
ACTN1-210ENST00000553779 ZNF524Q96C55 264 aa8.7□□□□□ -1.02
ACTN1-210ENST00000553779 ARL5BQ96KC2 179 aa8.7□□□□□ -1.02
ACTN1-210ENST00000553779 ZBTB18Q99592 522 aa8.7□□□□□ -1.02
ACTN1-210ENST00000553779 VRK1Q99986 396 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-210ENST00000553779 CCDC106Q9BWC9 280 aa8.7□□□□□ -1.02
ACTN1-210ENST00000553779 TAPBPLQ9BX59 468 aa8.7□□□□□ -1.02
ACTN1-210ENST00000553779 CENPHQ9H3R5 247 aa8.7□□□□□ -1.02
ACTN1-210ENST00000553779 EXOSC3Q9NQT5 275 aaKnown RBP8.7□□□□□ -1.02
ACTN1-210ENST00000553779 SLC17A5Q9NRA2 495 aa8.7□□□□□ -1.02
ACTN1-210ENST00000553779 DCTN4Q9UJW0 460 aa8.7□□□□□ -1.02
ACTN1-210ENST00000553779 ANK3Q12955 4377 aaKnown RBP8.69□□□□□ -1.02
ACTN1-210ENST00000553779 PRSS51A0A1B0GVH4 220 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 ZNF587BE7ETH6 402 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 EBAG9O00559 213 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 AP3D1O14617 1153 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 SHOX2O60902 331 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-210ENST00000553779 GPIP06744 558 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 ITGA5P08648 1049 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 APEHP13798 732 aaKnown RBP8.69□□□□□ -1.02
ACTN1-210ENST00000553779 NCF2P19878 526 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-210ENST00000553779 TACR3P29371 465 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 APOBEC3AP31941 199 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-210ENST00000553779 SLC16A1P53985 500 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 IL1RL1Q01638 556 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 LOXL1Q08397 574 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-210ENST00000553779 OR7A5Q15622 319 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 CHI3L2Q15782 390 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 GABRA6Q16445 453 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 SMU1Q2TAY7 513 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 KRT71Q3SY84 523 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 FAM174BQ3ZCQ3 159 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 C11orf71Q6IPW1 123 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 VHLLQ6RSH7 139 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 FRRS1Q6ZNA5 592 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 DNM1P46Q6ZS02 220 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 SPATA19Q7Z5L4 167 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 RNF130Q86XS8 419 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 CMIPQ8IY22 773 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 PEX5LQ8IYB4 626 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 KIRREL3Q8IZU9 778 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 CADM2Q8N3J6 435 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 OR8J2Q8NGG1 315 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 MIPOL1Q8TD10 442 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 NANOS1Q8WY41 292 aaKnown RBP8.69□□□□□ -1.02
ACTN1-210ENST00000553779 NEURL3Q96EH8 262 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 ZIM3Q96PE6 472 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 PANX1Q96RD7 426 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 AKTIPQ9H8T0 292 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 ADPRHL2Q9NX46 363 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 ASIC5Q9NY37 505 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 LGALS13Q9UHV8 139 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 KCNE5Q9UJ90 142 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 TRAPPC4Q9Y296 219 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 FLVCR1Q9Y5Y0 555 aa8.69□□□□□ -1.02
ACTN1-210ENST00000553779 CUBNO60494 3623 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 GOLGA8QA0A0J9YX86 632 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 LOC100289279A0A1B0GTE1 492 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 TMEM72A0PK05 275 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 GOLGA8OA6NCC3 632 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 TMEM247A6NEH6 219 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 CFAP73A6NFT4 308 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 ELOA3DA6NLF2 546 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-210ENST00000553779 CLDN24A6NM45 220 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 E9PBE3 544 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 GOLGA8NF8WBI6 632 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 KLF11O14901 512 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 ZNF208O43345 1280 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 LMX1BO60663 402 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 DNAJA2O60884 412 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 LY6HO94772 140 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 ANP32DO95626 131 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 CRYAAP02489 173 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 SERPINE1P05121 402 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 LBPP18428 481 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 CALRP27797 417 aaKnown RBP8.68□□□□□ -1.02
ACTN1-210ENST00000553779 MPGP29372 298 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 ABCE1P61221 599 aaKnown RBP8.68□□□□□ -1.02
ACTN1-210ENST00000553779 LSM11P83369 360 aaKnown RBP eCLIP8.68□□□□□ -1.02
ACTN1-210ENST00000553779 ELOA3BQ3SY89 546 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 HIKESHIQ53FT3 197 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 SPANXN4Q5MJ08 99 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 SAXO2Q658L1 398 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 TMEM225Q6GV28 225 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 PAQR6Q6TCH4 344 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 ADGRG3Q86Y34 549 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 ZNF440Q8IYI8 595 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 ZNF781Q8N8C0 355 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 POMGNT2Q8NAT1 580 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 FAM71CQ8NEG0 241 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 ELOA3Q8NG57 546 aa8.68□□□□□ -1.02
ACTN1-210ENST00000553779 OR10H5Q8NGA6 315 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms