RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 PLLPQ9Y342 182 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 MAP3K15Q6ZN16 1313 aa3.19□□□□□ -1.9
TDP1-207ENST00000553617 PLB1Q6P1J6 1458 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 ROCK2O75116 1388 aaKnown RBP3.18□□□□□ -1.9
TDP1-207ENST00000553617 INSRP06213 1382 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 METP08581 1390 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 TRAV26-1A0A087WT03 109 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 GSTTP1A0A1W2PQM5 241 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 TEX46H3BTG2 121 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 BTN3A3O00478 584 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 TOR1AO14656 332 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 TFECO14948 347 aaPredicted RBP3.18□□□□□ -1.9
TDP1-207ENST00000553617 ARPC3O15145 178 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 DENRO43583 198 aaKnown RBP3.18□□□□□ -1.9
TDP1-207ENST00000553617 UPK3AO75631 287 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 GPX5O75715 221 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 B3GAT3O94766 335 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 APOEP02649 317 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 IGF1P05019 195 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 SP1P08047 785 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 SERPINA6P08185 405 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 SNRPAP09012 282 aaKnown RBP3.18□□□□□ -1.9
TDP1-207ENST00000553617 CFC1BP0CG36 223 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 CFC1P0CG37 223 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 PNMA6AP0CW24 399 aaPredicted RBP3.18□□□□□ -1.9
TDP1-207ENST00000553617 ADORA3P0DMS8 318 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 ANXA3P12429 323 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 CCNB1P14635 433 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 XRCC1P18887 633 aaPredicted RBP3.18□□□□□ -1.9
TDP1-207ENST00000553617 RAB4AP20338 218 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 ARRB1P49407 418 aaPredicted RBP3.18□□□□□ -1.9
TDP1-207ENST00000553617 CEBPGP53567 150 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 EMP2P54851 167 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 CDH4P55283 916 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 TMEM50BP56557 158 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 REEP5Q00765 189 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 CYP24A1Q07973 514 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 SIGLEC14Q08ET2 396 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 STX3Q13277 289 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 MADCAM1Q13477 382 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 ZNF146Q15072 292 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 KRTAP24-1Q3LI83 254 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 TMEM30BQ3MIR4 351 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 CTSL3PQ5NE16 218 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 CELF3Q5SZQ8 465 aaKnown RBP3.18□□□□□ -1.9
TDP1-207ENST00000553617 RNLSQ5VYX0 342 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 PRR5LQ6MZQ0 368 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 RNASEKQ6P5S7 137 aaKnown RBP3.18□□□□□ -1.9
TDP1-207ENST00000553617 TMEM220Q6QAJ8 160 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 BTNL3Q6UXE8 466 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 RTL4Q6ZR62 310 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 STOX1Q6ZVD7 989 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 UTS2BQ765I0 119 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 SNX20Q7Z614 316 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 C10orf67Q8IYJ2 551 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 ZNF786Q8N393 782 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 GTPBP8Q8N3Z3 284 aaPredicted RBP3.18□□□□□ -1.9
TDP1-207ENST00000553617 C17orf78Q8N4C9 275 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 ZNF491Q8N8L2 437 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 TTC29Q8NA56 475 aaPredicted RBP3.18□□□□□ -1.9
TDP1-207ENST00000553617 AQP11Q8NBQ7 271 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 OR4C5Q8NGB2 326 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 OR5T3Q8NGG3 340 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 OR4D6Q8NGJ1 314 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 RHEBL1Q8TAI7 183 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 LZICQ8WZA0 190 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 RPL3LQ92901 407 aaKnown RBP3.18□□□□□ -1.9
TDP1-207ENST00000553617 WBP1Q96G27 269 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 DUS3LQ96G46 650 aaKnown RBP3.18□□□□□ -1.9
TDP1-207ENST00000553617 OMDQ99983 421 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 FAM173AQ9BQD7 235 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 SLC30A2Q9BRI3 323 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 TTYH2Q9BSA4 534 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 FEM1AQ9BSK4 669 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 TEKT3Q9BXF9 490 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 STRADBQ9C0K7 418 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 COMMD4Q9H0A8 199 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 MOB1AQ9H8S9 216 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 ELOVL3Q9HB03 270 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 IL1RL2Q9HB29 575 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 MRPS30Q9NP92 439 aaKnown RBP3.18□□□□□ -1.9
TDP1-207ENST00000553617 TAS2R16Q9NYV7 291 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 ADAM22Q9P0K1 906 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 SEC14L4Q9UDX3 406 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 NAGKQ9UJ70 344 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 SPATA2Q9UM82 520 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 SCML1Q9UN30 329 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 RPH3ALQ9UNE2 315 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 RASD1Q9Y272 281 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 AP3M1Q9Y2T2 418 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 CACNG2Q9Y698 323 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 ELP1O95163 1332 aa3.18□□□□□ -1.9
TDP1-207ENST00000553617 POLR3AO14802 1390 aaPredicted RBP3.17□□□□□ -1.9
TDP1-207ENST00000553617 A0A1W2PQ72 361 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 METTL21EPA6NDL7 271 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 SNTNA6NMZ2 147 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 E7ESA3 106 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 EFNA2O43921 213 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 DUS4LO95620 317 aaKnown RBP3.17□□□□□ -1.9
TDP1-207ENST00000553617 ASS1P00966 412 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms