RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 SLC7A1P30825 629 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 IDH3AP50213 366 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 HPCAP84074 193 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 SRSF2Q01130 221 aaKnown RBP10.42□□□□□ -0.74
SRP54-203ENST00000553544 GTDC1Q4AE62 458 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 SYT14P1Q58G82 188 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 TFAP2EQ6VUC0 442 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 TMPPEQ6ZT21 453 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 BHLHA15Q7RTS1 189 aaPredicted RBP10.42□□□□□ -0.74
SRP54-203ENST00000553544 SSX8Q7RTT4 187 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 NUFIP2Q7Z417 695 aaKnown RBP10.42□□□□□ -0.74
SRP54-203ENST00000553544 HMGN2P46Q86SG4 172 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 ATG4DQ86TL0 474 aaPredicted RBP10.42□□□□□ -0.74
SRP54-203ENST00000553544 ADGRG3Q86Y34 549 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 FUNDC1Q8IVP5 155 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 TUSC5Q8IXB3 177 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 ARIH2OSQ8N7S6 290 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 PNPT1Q8TCS8 783 aaKnown RBP10.42□□□□□ -0.74
SRP54-203ENST00000553544 SLC25A43Q8WUT9 341 aaPredicted RBP10.42□□□□□ -0.74
SRP54-203ENST00000553544 FAM168AQ92567 244 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 PROX1Q92786 737 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 VPS33AQ96AX1 596 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 ITCHQ96J02 903 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 OR5B2Q96R09 309 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 PSD2Q9BQI7 771 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 CCDC28BQ9BUN5 200 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 POTEKPQ9BYX7 375 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 PAIP1Q9H074 479 aaKnown RBP10.42□□□□□ -0.74
SRP54-203ENST00000553544 RMND5AQ9H871 391 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 BCO1Q9HAY6 547 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 SLC52A3Q9NQ40 469 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 TCF7L2Q9NQB0 619 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 SERINC1Q9NRX5 453 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 TMEM45AQ9NWC5 275 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 TRIM33Q9UPN9 1127 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 SHISA9B4DS77 424 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 FAAHO00519 579 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 SMAD9O15198 467 aaKnown RBP10.41□□□□□ -0.74
SRP54-203ENST00000553544 CYTIPO60759 359 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 DBIP07108 87 aaKnown RBP10.41□□□□□ -0.74
SRP54-203ENST00000553544 YES1P07947 543 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 IGHV4-31P0DP07 118 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 TROVE2P10155 538 aaKnown RBP eCLIP10.41□□□□□ -0.74
SRP54-203ENST00000553544 NR2F1P10589 423 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 ETFAP13804 333 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 USF1P22415 310 aaPredicted RBP10.41□□□□□ -0.74
SRP54-203ENST00000553544 FKBP2P26885 142 aaKnown RBP10.41□□□□□ -0.74
SRP54-203ENST00000553544 TTKP33981 857 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 RYKP34925 604 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 GZMKP49863 264 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 DIO1P49895 249 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 CDH11P55287 796 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 LSM11P83369 360 aaKnown RBP eCLIP10.41□□□□□ -0.74
SRP54-203ENST00000553544 MERTKQ12866 999 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 SQLEQ14534 574 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 PPA1Q15181 289 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 GRINAQ7Z429 371 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 AURKBQ96GD4 344 aaPredicted RBP10.41□□□□□ -0.74
SRP54-203ENST00000553544 CACNG6Q9BXT2 260 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 RABEP2Q9H5N1 569 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 CTPS2Q9NRF8 586 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 CBLN4Q9NTU7 201 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 KLHL9Q9P2J3 617 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 P2RX2Q9UBL9 471 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 CHRNA9Q9UGM1 479 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 PCDHB14Q9Y5E9 798 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 SVEP1Q4LDE5 3571 aa10.41□□□□□ -0.74
SRP54-203ENST00000553544 IGHV3-15A0A0B4J1V0 119 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 CDHR4A6H8M9 788 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 ZNF814B7Z6K7 855 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 AP3D1O14617 1153 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 ABCD4O14678 606 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 WIPF1O43516 503 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 ANP32DO95626 131 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 BMP2P12643 396 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 BMP4P12644 408 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 IL7RP16871 459 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 HNF1AP20823 631 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 CRATP43155 626 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 HTR3AP46098 478 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 IDH2P48735 452 aaKnown RBP10.4□□□□□ -0.74
SRP54-203ENST00000553544 CLK1P49759 484 aaKnown RBP10.4□□□□□ -0.74
SRP54-203ENST00000553544 DSTNP60981 165 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 STK11Q15831 433 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 C6orf10Q5SRN2 563 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 FAM120AOSQ5T036 256 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 LRIF1Q5T3J3 769 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 MRPL2Q5T653 305 aaKnown RBP10.4□□□□□ -0.74
SRP54-203ENST00000553544 SLC2A7Q6PXP3 512 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 BLOC1S3Q6QNY0 202 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 P2RY8Q86VZ1 359 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 FBXL14Q8N1E6 418 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 ZNF525Q8N782 197 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 ZNF563Q8TA94 476 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 SLC38A5Q8WUX1 472 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 WDR60Q8WVS4 1066 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 ARL5BQ96KC2 179 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 DHRS9Q9BPW9 319 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 ADAM19Q9H013 955 aa10.4□□□□□ -0.74
SRP54-203ENST00000553544 ZNF446Q9NWS9 450 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms