RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 HNRNPCL2B2RXH8 293 aa16.05■□□□□ 0.16
SHMT2-206ENST00000553529 HNRNPCL3B7ZW38 293 aa16.05■□□□□ 0.16
SHMT2-206ENST00000553529 HS3ST1O14792 307 aa16.05■□□□□ 0.16
SHMT2-206ENST00000553529 ZNF208O43345 1280 aa16.05■□□□□ 0.16
SHMT2-206ENST00000553529 HNRNPCL1O60812 293 aaKnown RBP16.05■□□□□ 0.16
SHMT2-206ENST00000553529 EDF1O60869 148 aaKnown RBP16.05■□□□□ 0.16
SHMT2-206ENST00000553529 OPN1SWP03999 348 aa16.05■□□□□ 0.16
SHMT2-206ENST00000553529 HNRNPCL4P0DMR1 293 aa16.05■□□□□ 0.16
SHMT2-206ENST00000553529 CBLP22681 906 aa16.05■□□□□ 0.16
SHMT2-206ENST00000553529 MTPNP58546 118 aa16.05■□□□□ 0.16
SHMT2-206ENST00000553529 TXNL4AP83876 142 aaKnown RBP16.05■□□□□ 0.16
SHMT2-206ENST00000553529 EGR4Q05215 589 aa16.05■□□□□ 0.16
SHMT2-206ENST00000553529 OTUD3Q5T2D3 398 aaPredicted RBP16.05■□□□□ 0.16
SHMT2-206ENST00000553529 PIGXQ8TBF5 258 aa16.05■□□□□ 0.16
SHMT2-206ENST00000553529 APH1AQ96BI3 265 aa16.05■□□□□ 0.16
SHMT2-206ENST00000553529 TACO1Q9BSH4 297 aaKnown RBP16.05■□□□□ 0.16
SHMT2-206ENST00000553529 PTDSS2Q9BVG9 487 aa16.05■□□□□ 0.16
SHMT2-206ENST00000553529 POTEKPQ9BYX7 375 aa16.05■□□□□ 0.16
SHMT2-206ENST00000553529 SLC7A10Q9NS82 523 aa16.05■□□□□ 0.16
SHMT2-206ENST00000553529 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.05■□□□□ 0.16
SHMT2-206ENST00000553529 LAMP3Q9UQV4 416 aa16.05■□□□□ 0.16
SHMT2-206ENST00000553529 ROS1P08922 2347 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 TMEM229AB2RXF0 380 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 SMAD7O15105 426 aaKnown RBP16.04■□□□□ 0.16
SHMT2-206ENST00000553529 TPST2O60704 377 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 THBS1P07996 1170 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 CXCR1P25024 350 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 IDUAP35475 653 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 HTR3AP46098 478 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 PTH2RP49190 550 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 SLC16A1P53985 500 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 SLC35A1P78382 337 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 GNA13Q14344 377 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 SLC17A1Q14916 467 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 P2RY6Q15077 328 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 FBXW9Q5XUX1 488 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 WBP2NLQ6ICG8 309 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 LINGO2Q7L985 606 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 YTHDF3Q7Z739 585 aaKnown RBP16.04■□□□□ 0.16
SHMT2-206ENST00000553529 PTOV1Q86YD1 416 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 BBS10Q8TAM1 723 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 KTI12Q96EK9 354 aaPredicted RBP16.04■□□□□ 0.16
SHMT2-206ENST00000553529 OR10A4Q9H209 315 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 BCL2L10Q9HD36 194 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 CALML5Q9NZT1 146 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 USP22Q9UPT9 525 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 RNF115Q9Y4L5 304 aa16.04■□□□□ 0.16
SHMT2-206ENST00000553529 MAP1AP78559 2803 aaPredicted RBP16.03■□□□□ 0.16
SHMT2-206ENST00000553529 IGKV1D-42A0A075B6H8 117 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 A0A0G2JND7 137 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 NPIPB7O75200 414 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 NDUFS7O75251 213 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 CDKN1AP38936 164 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 RPS5P46782 204 aaKnown RBP16.03■□□□□ 0.16
SHMT2-206ENST00000553529 ZNF83P51522 516 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 CDK6Q00534 326 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 DMTNQ08495 405 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 FADDQ13158 208 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 LARS2Q15031 903 aaKnown RBP16.03■□□□□ 0.16
SHMT2-206ENST00000553529 PDK3Q15120 406 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 PPA1Q15181 289 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 GPAT4Q86UL3 456 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 WDFY1Q8IWB7 410 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 SLC25A36Q96CQ1 311 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 ZHX1-C8orf76Q96EF9 292 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 VIPAS39Q9H9C1 493 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 EMC3Q9P0I2 261 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 EDARQ9UNE0 448 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 TRAPPC4Q9Y296 219 aa16.03■□□□□ 0.16
SHMT2-206ENST00000553529 MAGED1Q9Y5V3 778 aaPredicted RBP16.03■□□□□ 0.16
SHMT2-206ENST00000553529 A0A1W2PP18 115 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 CCT8L1PA6NM43 557 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 SHISA9B4DS77 424 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 C5orf58C9J3I9 102 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 H7C1Q1 480 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 PDLIM1O00151 329 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 FBP2O00757 339 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 MRPL33O75394 65 aaKnown RBP16.02■□□□□ 0.16
SHMT2-206ENST00000553529 HOXB4P17483 251 aaPredicted RBP16.02■□□□□ 0.16
SHMT2-206ENST00000553529 CDH2P19022 906 aaPredicted RBP16.02■□□□□ 0.16
SHMT2-206ENST00000553529 GGT1P19440 569 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 MAGEA8P43361 318 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 SELENOPP49908 381 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 ATP4BP51164 291 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 RIPPLY3P57055 190 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 SCARB2Q14108 478 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 PGGHGQ32M88 737 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 RUNDC3AQ59EK9 446 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 C1orf140Q5VVS0 124 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 PAQR6Q6TCH4 344 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 B3GLCTQ6Y288 498 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 C20orf204Q6ZNR8 217 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 DHDDSQ86SQ9 333 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 TSPYL5Q86VY4 417 aaPredicted RBP16.02■□□□□ 0.16
SHMT2-206ENST00000553529 ZNF440Q8IYI8 595 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 WDR31Q8NA23 367 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 SMYD1Q8NB12 490 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 OR9K2Q8NGE7 335 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 HSD17B8Q92506 261 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 HTRA1Q92743 480 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms