RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 UGT3A2Q3SY77 523 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 ANXA8L1Q5VT79 327 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 CYB5R2Q6BCY4 276 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 ZNF544Q6NX49 715 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 SEZ6L2Q6UXD5 910 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 ABHD12BQ7Z5M8 362 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-208ENST00000553370 HMGN2P46Q86SG4 172 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 NUDCD3Q8IVD9 361 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 EIF1ADQ8N9N8 165 aaKnown RBP8.72□□□□□ -1.01
ACTN1-208ENST00000553370 RAB8BQ92930 207 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 C3orf49Q96BT1 292 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 ROPN1LQ96C74 230 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 C3orf30Q96M34 536 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 TNFRSF13CQ96RJ3 184 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 PIMREGQ9BSJ6 248 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 INPP5KQ9BT40 448 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 OR11A1Q9GZK7 315 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 ZNF350Q9GZX5 532 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 CHODLQ9H9P2 273 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 POLE3Q9NRF9 147 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 MARCOQ9UEW3 520 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-208ENST00000553370 ZDHHC2Q9UIJ5 367 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 ING1Q9UK53 422 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-208ENST00000553370 AMDHD2Q9Y303 409 aa8.72□□□□□ -1.01
ACTN1-208ENST00000553370 WNK2Q9Y3S1 2297 aa8.71□□□□□ -1.01
ACTN1-208ENST00000553370 IGKV3D-15A0A087WSY6 115 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 TMED7-TICAM2A0A0A6YYA0 188 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 WDR91A4D1P6 747 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 RNASET2O00584 256 aaKnown RBP8.71□□□□□ -1.02
ACTN1-208ENST00000553370 GPRIN2O60269 458 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 EIF1BO60739 113 aaKnown RBP8.71□□□□□ -1.02
ACTN1-208ENST00000553370 SCN2BO60939 215 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 PGM3O95394 542 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 NUDT17P0C025 328 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 MYZAPP0CAP1 466 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 IDH2P48735 452 aaKnown RBP8.71□□□□□ -1.02
ACTN1-208ENST00000553370 PDLIM4P50479 330 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 POLR2HP52434 150 aaKnown RBP8.71□□□□□ -1.02
ACTN1-208ENST00000553370 CLNS1AP54105 237 aaKnown RBP8.71□□□□□ -1.02
ACTN1-208ENST00000553370 CLDN8P56748 225 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 SNRPD2P62316 118 aaKnown RBP8.71□□□□□ -1.02
ACTN1-208ENST00000553370 EMX2Q04743 252 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 PDK3Q15120 406 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 SLC46A3Q7Z3Q1 461 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 GPAT4Q86UL3 456 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 CCDC103Q8IW40 242 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 PHC2Q8IXK0 858 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 TRIML2Q8N7C3 387 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 OR52E4Q8NGH9 312 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 WDR60Q8WVS4 1066 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 OIT3Q8WWZ8 545 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.71□□□□□ -1.024e-7■■■■■ 58.1
ACTN1-208ENST00000553370 ZNF75CPQ92670 426 aaPredicted RBP8.71□□□□□ -1.02
ACTN1-208ENST00000553370 FBXO17Q96EF6 278 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 SLC35A5Q9BS91 424 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 SERHL2Q9H4I8 314 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 FRRS1LQ9P0K9 344 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 TMEM181Q9P2C4 612 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 MALT1Q9UDY8 824 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 KCNS2Q9ULS6 477 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 TMED7Q9Y3B3 224 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 PCDHB14Q9Y5E9 798 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 SLC25A15Q9Y619 301 aa8.71□□□□□ -1.02
ACTN1-208ENST00000553370 ZNF716A6NP11 495 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 ATP6V1G2-DDX39BF2Z307 99 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 H7C417 338 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 ETV2O00321 342 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-208ENST00000553370 BPGMP07738 259 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 ERCC1P07992 297 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-208ENST00000553370 NR2F1P10589 423 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 IL7RP16871 459 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 SRD5A1P18405 259 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 USF1P22415 310 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-208ENST00000553370 CXCR1P25024 350 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 GTF2E2P29084 291 aaKnown RBP8.7□□□□□ -1.02
ACTN1-208ENST00000553370 S100A3P33764 101 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 PGM1P36871 562 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 CLK1P49759 484 aaKnown RBP8.7□□□□□ -1.02
ACTN1-208ENST00000553370 GZMKP49863 264 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 EFNA4P52798 201 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 NME5P56597 212 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 PRPS1P60891 318 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 UBE2NP61088 152 aaKnown RBP8.7□□□□□ -1.02
ACTN1-208ENST00000553370 COPZ1P61923 177 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 PHC1P78364 1004 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 KCNJ10P78508 379 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 VLDLRP98155 873 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 MAPK14Q16539 360 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 FXNQ16595 210 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 DPY19L1Q2PZI1 675 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 IQCCQ4KMZ1 466 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 OTUD3Q5T2D3 398 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-208ENST00000553370 TYW3Q6IPR3 259 aaKnown RBP8.7□□□□□ -1.02
ACTN1-208ENST00000553370 FAM166AQ6J272 317 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 EMBQ6PCB8 327 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 B3GLCTQ6Y288 498 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 AAED1Q7RTV5 226 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 LSRQ86X29 649 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-208ENST00000553370 RIMKLAQ8IXN7 391 aa8.7□□□□□ -1.02
ACTN1-208ENST00000553370 C17orf78Q8N4C9 275 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms