RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 COX5AP20674 150 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 EDNRAP25101 427 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 IDUAP35475 653 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 PPA1Q15181 289 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 PAGE3Q5JUK9 113 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 TIMM23BQ5SRD1 257 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 ADAM5Q6NVV9 412 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 PRSS57Q6UWY2 283 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.45□□□□□ -0.58
ACTN1-207ENST00000553290 KRTAP1-3Q8IUG1 177 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 ZNF433Q8N7K0 673 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-207ENST00000553290 ZNF611Q8N823 705 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 TMEM171Q8WVE6 324 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 MAL2Q969L2 176 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 ASB6Q9NWX5 421 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 SLAMF8Q9P0V8 285 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 SLC9A8Q9Y2E8 581 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 CHST2Q9Y4C5 530 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 RNF115Q9Y4L5 304 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 ACANP16112 2415 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 TRBV5-3A0A0A0MS03 114 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 A0A1W2PP18 115 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 LIPT2A6NK58 231 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 A8MVM7 634 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 EVPLLA8MZ36 301 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 RAMP1O60894 148 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 PRG2P13727 222 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 GPX2P18283 190 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 CEACAM7Q14002 265 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 SLC17A1Q14916 467 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 STK11Q15831 433 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 Q5PR19 223 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 OTUD3Q5T2D3 398 aaPredicted RBP11.44□□□□□ -0.58
ACTN1-207ENST00000553290 GCNT6Q5T4J0 391 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 REEP3Q6NUK4 255 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 SERPINA11Q86U17 422 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 KRT73Q86Y46 540 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 MSRB3Q8IXL7 192 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 IGFBPL1Q8WX77 278 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 AKAP1Q92667 903 aaKnown RBP eCLIP11.44□□□□□ -0.58
ACTN1-207ENST00000553290 SIKE1Q9BRV8 207 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 SPATA5L1Q9BVQ7 753 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 SF3B5Q9BWJ5 86 aaKnown RBP11.44□□□□□ -0.58
ACTN1-207ENST00000553290 TAPBPLQ9BX59 468 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 CXorf56Q9H5V9 222 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 PIF1Q9H611 641 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 VAPAQ9P0L0 249 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 MALT1Q9UDY8 824 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 TRIM33Q9UPN9 1127 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 FLVCR1Q9Y5Y0 555 aa11.44□□□□□ -0.58
ACTN1-207ENST00000553290 CIB4A0PJX0 185 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 OR5H1A6NKK0 313 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 CCT8L1PA6NM43 557 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 EDF1O60869 148 aaKnown RBP11.43□□□□□ -0.58
ACTN1-207ENST00000553290 IGHV3-9P01782 118 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 ADSLP30566 484 aaPredicted RBP11.43□□□□□ -0.58
ACTN1-207ENST00000553290 PRKAR1BP31321 381 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 NTF4P34130 210 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 CDK6Q00534 326 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 BNIP2Q12982 314 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 OR7A5Q15622 319 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 C1orf140Q5VVS0 124 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 OR7E24Q6IFN5 339 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 SEZ6L2Q6UXD5 910 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 CASP12Q6UXS9 341 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 TMEM99Q8N816 258 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 NFKBIDQ8NI38 313 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 STK35Q8TDR2 534 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 FBXW5Q969U6 566 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 TMEM45BQ96B21 275 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 C3orf49Q96BT1 292 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 GSX2Q9BZM3 304 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 TMEM38AQ9H6F2 299 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 TAS2R16Q9NYV7 291 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 UPB1Q9UBR1 384 aa11.43□□□□□ -0.58
ACTN1-207ENST00000553290 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.43□□□□□ -0.58
ACTN1-207ENST00000553290 DPRXA6NFQ7 191 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 AQP7P3A6NL99 342 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 TMEM229AB2RXF0 380 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 CLOCKO15516 846 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 FRS3O43559 492 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 NPIPB7O75200 414 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 RAD51DO75771 328 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 AKR7A3O95154 331 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 VAMP5O95183 116 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 PAX1P15863 534 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 SLC6A2P23975 617 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 BSPH1Q075Z2 132 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 FAPQ12884 760 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 SCARB2Q14108 478 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 TMEM225Q6GV28 225 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 DHRS4L2Q6PKH6 230 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 DLEU7Q6UYE1 221 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 ATG4DQ86TL0 474 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-207ENST00000553290 BIVMQ86UB2 503 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 BHLHE22Q8NFJ8 381 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-207ENST00000553290 LILRB1Q8NHL6 650 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-207ENST00000553290 TSPEARQ8WU66 669 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 THOC1Q96FV9 657 aaKnown RBP11.42□□□□□ -0.58
ACTN1-207ENST00000553290 PERPQ96FX8 193 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms