RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 PGS1Q32NB8 556 aa14.2□□□□□ -0.14
RAB5C-209ENST00000552162 C6orf136Q5SQH8 315 aa14.2□□□□□ -0.14
RAB5C-209ENST00000552162 VHLLQ6RSH7 139 aa14.2□□□□□ -0.14
RAB5C-209ENST00000552162 HMGN2P46Q86SG4 172 aa14.2□□□□□ -0.14
RAB5C-209ENST00000552162 ARFGAP2Q8N6H7 521 aa14.2□□□□□ -0.14
RAB5C-209ENST00000552162 POMGNT2Q8NAT1 580 aa14.2□□□□□ -0.14
RAB5C-209ENST00000552162 C3orf30Q96M34 536 aa14.2□□□□□ -0.14
RAB5C-209ENST00000552162 KATNB1Q9BVA0 655 aa14.2□□□□□ -0.14
RAB5C-209ENST00000552162 TXLNGYQ9BZA5 131 aa14.2□□□□□ -0.14
RAB5C-209ENST00000552162 RAB1BQ9H0U4 201 aa14.2□□□□□ -0.14
RAB5C-209ENST00000552162 PLK3Q9H4B4 646 aa14.2□□□□□ -0.14
RAB5C-209ENST00000552162 OBP2BQ9NPH6 170 aa14.2□□□□□ -0.14
RAB5C-209ENST00000552162 EXOSC3Q9NQT5 275 aaKnown RBP14.2□□□□□ -0.14
RAB5C-209ENST00000552162 POLE3Q9NRF9 147 aa14.2□□□□□ -0.14
RAB5C-209ENST00000552162 TMED7Q9Y3B3 224 aa14.2□□□□□ -0.14
RAB5C-209ENST00000552162 TMEM72A0PK05 275 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 CLDN24A6NM45 220 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 SNUPNO95149 360 aaKnown RBP14.19□□□□□ -0.14
RAB5C-209ENST00000552162 AGR2O95994 175 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 TACSTD2P09758 323 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 OR12D1P0DN82 309 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 KRT4P19013 534 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 FUT5Q11128 374 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 TBRG1Q3YBR2 411 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 ATAD3BQ5T9A4 648 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 PAQR6Q6TCH4 344 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 FRRS1Q6ZNA5 592 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 AAED1Q7RTV5 226 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 ABHD12BQ7Z5M8 362 aaPredicted RBP14.19□□□□□ -0.14
RAB5C-209ENST00000552162 C4orf33Q8N1A6 199 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 LINC01356Q8N9X3 169 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 MIPOL1Q8TD10 442 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 HPS1Q92902 700 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 BOD1Q96IK1 185 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 SNX18Q96RF0 628 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 ADAM19Q9H013 955 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 OSGIN1Q9UJX0 560 aa14.19□□□□□ -0.14
RAB5C-209ENST00000552162 ZC3H12DA2A288 527 aaKnown RBP14.18□□□□□ -0.14
RAB5C-209ENST00000552162 SMIM23A6NLE4 172 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 AP3D1O14617 1153 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 ZNF208O43345 1280 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 NPHS1O60500 1241 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 LILRA1O75019 489 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 SKAP2O75563 359 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-209ENST00000552162 GUSBP08236 651 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 G6PDP11413 515 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 DAOP14920 347 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 POLR2HP52434 150 aaKnown RBP14.18□□□□□ -0.14
RAB5C-209ENST00000552162 KCNJ10P78508 379 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 NAAAQ02083 359 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 OTUD3Q5T2D3 398 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-209ENST00000552162 OR4F3Q6IEY1 312 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 TNFAIP8L2Q6P589 184 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-209ENST00000552162 RINLQ6ZS11 566 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 IFT20Q8IY31 132 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 ZIC4Q8N9L1 334 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 OR9K2Q8NGE7 335 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 OR4A15Q8NGL6 344 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 OR1K1Q8NGR3 316 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 XAGE5Q8WWM1 108 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 PMM1Q92871 262 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 RAB8BQ92930 207 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 ROPN1LQ96C74 230 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 ZG16BQ96DA0 208 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 AURKBQ96GD4 344 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-209ENST00000552162 ZNF385AQ96PM9 386 aaKnown RBP14.18□□□□□ -0.14
RAB5C-209ENST00000552162 SAP130Q9H0E3 1048 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.18□□□□□ -0.14
RAB5C-209ENST00000552162 TMEM45AQ9NWC5 275 aa14.18□□□□□ -0.14
RAB5C-209ENST00000552162 KRT33AO76009 404 aa14.17□□□□□ -0.14
RAB5C-209ENST00000552162 LGI1O95970 557 aa14.17□□□□□ -0.14
RAB5C-209ENST00000552162 SHBGP04278 402 aa14.17□□□□□ -0.14
RAB5C-209ENST00000552162 ERCC1P07992 297 aaPredicted RBP14.17□□□□□ -0.14
RAB5C-209ENST00000552162 CECR9P0C854 216 aa14.17□□□□□ -0.14
RAB5C-209ENST00000552162 TACR3P29371 465 aa14.17□□□□□ -0.14
RAB5C-209ENST00000552162 ALDH3A1P30838 453 aa14.17□□□□□ -0.14
RAB5C-209ENST00000552162 SLC1A3P43003 542 aa14.17□□□□□ -0.14
RAB5C-209ENST00000552162 CDH15P55291 814 aa14.17□□□□□ -0.14
RAB5C-209ENST00000552162 UBE2NP61088 152 aaKnown RBP14.17□□□□□ -0.14
RAB5C-209ENST00000552162 AP1ARQ63HQ0 302 aa14.17□□□□□ -0.14
RAB5C-209ENST00000552162 CNOT9Q92600 299 aaKnown RBP14.17□□□□□ -0.14
RAB5C-209ENST00000552162 ALKBH3Q96Q83 286 aaPredicted RBP14.17□□□□□ -0.14
RAB5C-209ENST00000552162 MECRQ9BV79 373 aa14.17□□□□□ -0.14
RAB5C-209ENST00000552162 SF3B5Q9BWJ5 86 aaKnown RBP14.17□□□□□ -0.14
RAB5C-209ENST00000552162 OCEL1Q9H607 264 aa14.17□□□□□ -0.14
RAB5C-209ENST00000552162 FBXO9Q9UK97 447 aaPredicted RBP14.17□□□□□ -0.14
RAB5C-209ENST00000552162 ZNF587BE7ETH6 402 aa14.16□□□□□ -0.14
RAB5C-209ENST00000552162 hCG_2039718K7EN88 272 aa14.16□□□□□ -0.14
RAB5C-209ENST00000552162 RNASET2O00584 256 aaKnown RBP14.16□□□□□ -0.14
RAB5C-209ENST00000552162 AKR7A3O95154 331 aa14.16□□□□□ -0.14
RAB5C-209ENST00000552162 VENTXO95231 258 aa14.16□□□□□ -0.14
RAB5C-209ENST00000552162 PAX7P23759 505 aa14.16□□□□□ -0.14
RAB5C-209ENST00000552162 CALCRP30988 508 aa14.16□□□□□ -0.14
RAB5C-209ENST00000552162 CLDN8P56748 225 aa14.16□□□□□ -0.14
RAB5C-209ENST00000552162 TUBA1BP68363 451 aa14.16□□□□□ -0.14
RAB5C-209ENST00000552162 TUBA4AP68366 448 aa14.16□□□□□ -0.14
RAB5C-209ENST00000552162 HPCAP84074 193 aa14.16□□□□□ -0.14
RAB5C-209ENST00000552162 LGALS3BPQ08380 585 aa14.16□□□□□ -0.14
RAB5C-209ENST00000552162 TRIP10Q15642 601 aa14.16□□□□□ -0.14
RAB5C-209ENST00000552162 GPAT3Q53EU6 434 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms