RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 LNX2Q8N448 690 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 S100A16Q96FQ6 103 aaKnown RBP11.28□□□□□ -0.6
ERBB3-219ENST00000551242 HS6ST2Q96MM7 605 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 CASD1Q96PB1 797 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 UTP23Q9BRU9 249 aaKnown RBP11.28□□□□□ -0.6
ERBB3-219ENST00000551242 CMC2Q9NRP2 79 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 GNG8Q9UK08 70 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 MEIS3P1A6NDR6 274 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 IDSB3KWA1 339 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 LCMT2O60294 686 aaKnown RBP11.28□□□□□ -0.6
ERBB3-219ENST00000551242 EIF3GO75821 320 aaKnown RBP eCLIP11.28□□□□□ -0.6
ERBB3-219ENST00000551242 GP1BAP07359 652 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 GKN3PP0CG01 181 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 RPA2P15927 270 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 TIMP2P16035 220 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 ADCYAP1P18509 176 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 EDNRAP25101 427 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 PRKCZQ05513 592 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 STX4Q12846 297 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 SWI5Q1ZZU3 235 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 PCGF3Q3KNV8 242 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 PWWP2BQ6NUJ5 590 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 NUDT18Q6ZVK8 323 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 MOB3CQ70IA8 216 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 SLC16A13Q7RTY0 426 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 ZNF546Q86UE3 836 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 DUSP19Q8WTR2 217 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 C10orf90Q96M02 699 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 MNTQ99583 582 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 OR5V1Q9UGF6 321 aa11.28□□□□□ -0.6
ERBB3-219ENST00000551242 CACNA1CQ13936 2221 aa11.27□□□□□ -0.6
ERBB3-219ENST00000551242 TRAV14DV4A0A0A6YYC5 116 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 A0A1B0GW55 424 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 MAN2B1O00754 1011 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 ZNF749O43361 778 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 EIF4E2O60573 245 aaKnown RBP11.27□□□□□ -0.61
ERBB3-219ENST00000551242 AKR7A3O95154 331 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 DUX4L2P0CJ85 424 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 DUX4L3P0CJ86 424 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 DUX4L4P0CJ87 422 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 DUX4L5P0CJ88 424 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 DUX4L6P0CJ89 424 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 DUX4L7P0CJ90 424 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 SIRPAP78324 504 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 MLC1Q15049 377 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 C4orf46Q504U0 113 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 YOD1Q5VVQ6 348 aaPredicted RBP11.27□□□□□ -0.61
ERBB3-219ENST00000551242 HTR3DQ70Z44 454 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 OR4C16Q8NGL9 310 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 OR1S2Q8NGQ3 325 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 SFT2D1Q8WV19 159 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 OTUB2Q96DC9 234 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 AIF1LQ9BQI0 150 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 PRSS27Q9BQR3 290 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 ZDHHC5Q9C0B5 715 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 RHBGQ9H310 441 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 KLHL31Q9H511 634 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 SYNPO2LQ9H987 977 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 DUX4Q9UBX2 424 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 PQLC2LA1A4F0 135 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 OGG1O15527 345 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 PPP1R3DO95685 299 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 LATS1O95835 1130 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 MECP2P51608 486 aaKnown RBP11.27□□□□□ -0.61
ERBB3-219ENST00000551242 TAS2R20P59543 309 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 ATXN7L3Q14CW9 347 aaPredicted RBP11.27□□□□□ -0.61
ERBB3-219ENST00000551242 LRRC37A5PQ49AS3 106 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 OR4C11Q6IEV9 310 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 OR2W3Q7Z3T1 314 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 C12orf45Q8N5I9 185 aaPredicted RBP11.27□□□□□ -0.61
ERBB3-219ENST00000551242 OR14A16Q8NHC5 309 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 SETD7Q8WTS6 366 aaKnown RBP11.27□□□□□ -0.61
ERBB3-219ENST00000551242 RAD51AP1Q96B01 352 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 CRB3Q9BUF7 120 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 AICDAQ9GZX7 198 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 C6orf106Q9H6K1 298 aaPredicted RBP11.27□□□□□ -0.61
ERBB3-219ENST00000551242 IL21RQ9HBE5 538 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 CLDND1Q9NY35 253 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 SPG21Q9NZD8 308 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 PCDHB10Q9UN67 800 aa11.27□□□□□ -0.61
ERBB3-219ENST00000551242 TMEM200CA6NKL6 621 aa11.26□□□□□ -0.61
ERBB3-219ENST00000551242 RIIAD1A6NNX1 92 aa11.26□□□□□ -0.61
ERBB3-219ENST00000551242 ACOT7O00154 380 aa11.26□□□□□ -0.61
ERBB3-219ENST00000551242 ACAA1P09110 424 aaPredicted RBP11.26□□□□□ -0.61
ERBB3-219ENST00000551242 MGMTP16455 207 aa11.26□□□□□ -0.61
ERBB3-219ENST00000551242 SLC2A5P22732 501 aa11.26□□□□□ -0.61
ERBB3-219ENST00000551242 ACADLP28330 430 aa11.26□□□□□ -0.61
ERBB3-219ENST00000551242 RFC3P40938 356 aa11.26□□□□□ -0.61
ERBB3-219ENST00000551242 ANXA11P50995 505 aaKnown RBP11.26□□□□□ -0.61
ERBB3-219ENST00000551242 PRMT2P55345 433 aa11.26□□□□□ -0.61
ERBB3-219ENST00000551242 KRT33BQ14525 404 aa11.26□□□□□ -0.61
ERBB3-219ENST00000551242 RBMS2Q15434 407 aaKnown RBP11.26□□□□□ -0.61
ERBB3-219ENST00000551242 SMAD2Q15796 467 aaKnown RBP11.26□□□□□ -0.61
ERBB3-219ENST00000551242 LCTLQ6UWM7 567 aa11.26□□□□□ -0.61
ERBB3-219ENST00000551242 ZNF547Q8IVP9 402 aa11.26□□□□□ -0.61
ERBB3-219ENST00000551242 OR1M1Q8NGA1 313 aa11.26□□□□□ -0.61
ERBB3-219ENST00000551242 OR9A2Q8NGT5 310 aa11.26□□□□□ -0.61
ERBB3-219ENST00000551242 SNX33Q8WV41 574 aa11.26□□□□□ -0.61
ERBB3-219ENST00000551242 NR4A3Q92570 626 aa11.26□□□□□ -0.61
ERBB3-219ENST00000551242 ATG4BQ9Y4P1 393 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms