RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 GAL3ST4Q96RP7 486 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 SH3GL2Q99962 352 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 ANGPTL4Q9BY76 406 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 ROGDIQ9GZN7 287 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 DEFB127Q9H1M4 99 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 GLIPR2Q9H4G4 154 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 IL1RL2Q9HB29 575 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 FOLH1BQ9HBA9 442 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 MS4A12Q9NXJ0 267 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 TAS2R7Q9NYW3 318 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 VPS29Q9UBQ0 182 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 TEKT2Q9UIF3 430 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 HAO1Q9UJM8 370 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 FBXL2Q9UKC9 423 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 RNF6Q9Y252 685 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 MRPS33Q9Y291 106 aaKnown RBP4.36□□□□□ -1.71
SCAF11-214ENST00000550893 C15orf41Q9Y2V0 281 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 KLF13Q9Y2Y9 288 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-214ENST00000550893 POLR3HQ9Y535 204 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-214ENST00000550893 KLF2Q9Y5W3 355 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-214ENST00000550893 IKBKGQ9Y6K9 419 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 CLCA3PQ9Y6N3 262 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 CR1P17927 2039 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 CHD3Q12873 2000 aaKnown RBP4.36□□□□□ -1.71
SCAF11-214ENST00000550893 FN1P02751 2386 aaKnown RBP4.35□□□□□ -1.71
SCAF11-214ENST00000550893 C2CD3Q4AC94 2353 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 TRGV8A0A0C4DH27 118 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 IQANK1A0A1B0GTG1 560 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 C1orf226A1L170 272 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 NKX2-6A6NCS4 301 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 PABPN1LA6NDY0 278 aaKnown RBP4.35□□□□□ -1.71
SCAF11-214ENST00000550893 FRG2CA6NGY1 282 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 SAC3D1A6NKF1 404 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 OR6C76A6NM76 312 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 NPIPB9F8W1W9 429 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 H0Y3Z8 333 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 H0YC42 278 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 MS4A18H0YCH9 400 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 ZNF195O14628 629 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 FADS1O60427 444 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 PLOD3O60568 738 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 TBX19O60806 448 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 CDH16O75309 829 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 BCAS1O75363 584 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-214ENST00000550893 SPAG7O75391 227 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 PDE9AO76083 593 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 IFNA16P05015 189 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 PORP16435 677 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-214ENST00000550893 EFNA1P20827 205 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-214ENST00000550893 AGAP20933 346 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 ZNF10P21506 573 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-214ENST00000550893 CNR1P21554 472 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 PSMA4P25789 261 aaKnown RBP4.35□□□□□ -1.71
SCAF11-214ENST00000550893 CEACAM8P31997 349 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-214ENST00000550893 LHX2P50458 406 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 RAP1GDS1P52306 607 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 ZNF136P52737 540 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 MAPK12P53778 367 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 TPD52P55327 224 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-214ENST00000550893 CLDN18P56856 261 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 DSCR9P59020 149 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 TRA2BP62995 288 aaKnown RBP4.35□□□□□ -1.71
SCAF11-214ENST00000550893 ZNF763Q0D2J5 394 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 STX4Q12846 297 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 BLMHQ13867 455 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 MAPK11Q15759 364 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 HIST2H2ACQ16777 129 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-214ENST00000550893 ACSF3Q4G176 576 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-214ENST00000550893 EIPR1Q53HC9 387 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 NHSL2Q5HYW2 709 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.35□□□□□ -1.71
SCAF11-214ENST00000550893 CCNYL2Q5T2Q4 361 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 C10orf62Q5T681 223 aaPredicted RBP4.35□□□□□ -1.71
SCAF11-214ENST00000550893 IRAK1BP1Q5VVH5 260 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 HIST2H2AA3Q6FI13 130 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 KRTAP5-11Q6L8G4 156 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 KLC3Q6P597 504 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 C18orf65Q6ZTR6 163 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 OLIG3Q7RTU3 272 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 EXOC3L1Q86VI1 746 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 OR2L13Q8N349 312 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 FADS6Q8N9I5 356 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 OR4K14Q8NGD5 310 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 OR5M9Q8NGP3 310 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 CLHC1Q8NHS4 586 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 TCP10LQ8TDR4 215 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 NRGNQ92686 78 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 RIT1Q92963 219 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 EXOSC8Q96B26 276 aaKnown RBP4.35□□□□□ -1.71
SCAF11-214ENST00000550893 KLHL29Q96CT2 875 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 OMA1Q96E52 524 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 ARSGQ96EG1 525 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 AMDHD1Q96NU7 426 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 ZIM3Q96PE6 472 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 SMC6Q96SB8 1091 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 FAM173AQ9BQD7 235 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 TTYH2Q9BSA4 534 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 LMF2Q9BU23 707 aaKnown RBP4.35□□□□□ -1.71
SCAF11-214ENST00000550893 UGT2B28Q9BY64 529 aa4.35□□□□□ -1.71
SCAF11-214ENST00000550893 UCK2Q9BZX2 261 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms