RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 CD79BP40259 229 aa9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 EPHA5P54756 1037 aa9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 HEPHL1Q6MZM0 1159 aa9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 ULK3Q6PHR2 472 aa9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 ZNF836Q6ZNA1 936 aa9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 TMEM150AQ86TG1 271 aa9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 GLB1L2Q8IW92 636 aa9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 C12orf45Q8N5I9 185 aaPredicted RBP9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 SIRT6Q8N6T7 355 aa9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 OR2AJ1Q8NGZ0 328 aa9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 RAB40AQ8WXH6 277 aa9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 ZG16BQ96DA0 208 aa9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 SLC35A4Q96G79 324 aa9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 SEC22AQ96IW7 307 aa9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 SDHAF2Q9NX18 166 aa9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 DNMT3BQ9UBC3 853 aaKnown RBP9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 NPIPA1Q9UND3 350 aa9.48□□□□□ -0.89
SMARCC2-209ENST00000550164 HIDE1A8MVS5 230 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 KRBOX1C9JBD0 128 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 H7C1C5 153 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 PEX12O00623 359 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 GNRH1P01148 92 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 HSD11B1P28845 292 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 DLSTP36957 453 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 LCN6P62502 163 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 RIPPLY1Q0D2K3 151 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 CHAF1BQ13112 559 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 GRM7Q14831 915 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 CLPPQ16740 277 aaPredicted RBP9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 TSSK4Q6SA08 328 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 IDO2Q6ZQW0 420 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 TECPR1Q7Z6L1 1165 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 CD163Q86VB7 1156 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 TMEM106AQ96A25 262 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 CNRIP1Q96F85 164 aaPredicted RBP9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 ANKRD19PQ9H560 264 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 NARFLQ9H6Q4 476 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 PLEKHM1Q9Y4G2 1056 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 hCG_1807616A0A1W2PRN6 198 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 ZNF736B4DX44 427 aaPredicted RBP9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 GPR171O14626 319 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 PRAMEF2O60811 474 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 TP53P04637 393 aaPredicted RBP9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 CLUP10909 449 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 HOXC8P31273 242 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 RIDAP52758 137 aaKnown RBP9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 UBE2MP61081 183 aaKnown RBP9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 RBMS2Q15434 407 aaKnown RBP9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 TRMT12Q53H54 448 aaKnown RBP9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 ZNF765Q7L2R6 523 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 ABI3BPQ7Z7G0 1075 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 SLC35F3Q8IY50 421 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 OR4Q3Q8NH05 313 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 MS4A6EQ96DS6 147 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 KLHL15Q96M94 604 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 MARVELD1Q9BSK0 173 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 HCAR1Q9BXC0 346 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 BCL2L10Q9HD36 194 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 CHMP1AQ9HD42 196 aaPredicted RBP9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 CYSLTR2Q9NS75 346 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 GPATCH2Q9NW75 528 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 TESQ9UGI8 421 aaKnown RBP9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 ICKQ9UPZ9 632 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 TEX13DA0A0J9YY54 714 aaPredicted RBP9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 MAN2B1O00754 1011 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 PRICKLE3O43900 615 aaPredicted RBP9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 LDOC1O95751 146 aaPredicted RBP9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 CTSLP07711 333 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 ITGA5P08648 1049 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 PPP3CBP16298 524 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 SRMP19623 302 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 METAP1P53582 386 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 PRPS1P60891 318 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 CXADRP78310 365 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.47□□□□□ -0.892e-7■■□□□ 12.7
SMARCC2-209ENST00000550164 ZNF628Q5EBL2 1059 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 YOD1Q5VVQ6 348 aaPredicted RBP9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 DNM1P34Q6PK57 102 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 TMEM64Q6YI46 380 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 AMER3Q8N944 861 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 OR10K1Q8NGX5 313 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 NEK7Q8TDX7 302 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 SMARCD2Q92925 531 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 DVL3Q92997 716 aaPredicted RBP9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 C19orf43Q9BQ61 176 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 REV1Q9UBZ9 1251 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 GLS2Q9UI32 602 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 EDARQ9UNE0 448 aa9.47□□□□□ -0.89
SMARCC2-209ENST00000550164 CHP2O43745 196 aa9.46□□□□□ -0.89
SMARCC2-209ENST00000550164 SDC3O75056 442 aa9.46□□□□□ -0.89
SMARCC2-209ENST00000550164 VNN2O95498 520 aa9.46□□□□□ -0.89
SMARCC2-209ENST00000550164 TNFP01375 233 aa9.46□□□□□ -0.89
SMARCC2-209ENST00000550164 SLC6A9P48067 706 aa9.46□□□□□ -0.89
SMARCC2-209ENST00000550164 CDK5Q00535 292 aa9.46□□□□□ -0.89
SMARCC2-209ENST00000550164 TMEM201Q5SNT2 666 aa9.46□□□□□ -0.89
SMARCC2-209ENST00000550164 ZSCAN1Q8NBB4 408 aa9.46□□□□□ -0.89
SMARCC2-209ENST00000550164 OR13C3Q8NGS6 347 aa9.46□□□□□ -0.89
SMARCC2-209ENST00000550164 OR2L8Q8NGY9 312 aa9.46□□□□□ -0.89
SMARCC2-209ENST00000550164 ALG12Q9BV10 488 aa9.46□□□□□ -0.89
SMARCC2-209ENST00000550164 NXF2Q9GZY0 626 aaKnown RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms