RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 OR4F15Q8NGB8 312 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 OR5M3Q8NGP4 307 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 TTC9Q92623 222 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 FRMD6Q96NE9 622 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 PNO1Q9NRX1 252 aaKnown RBP9.1□□□□□ -0.95
RAB5B-206ENST00000549505 DHCR7Q9UBM7 475 aaKnown RBP9.1□□□□□ -0.95
RAB5B-206ENST00000549505 PCDHGB7Q9Y5F8 929 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 N6AMT1Q9Y5N5 214 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 LAMA3Q16787 3333 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 TMEM200CA6NKL6 621 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 PTTG1O95997 202 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 HSMCR30P0CW71 290 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 ABCD3P28288 659 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 P2RX1P51575 399 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 ACTA2P62736 377 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 ACTG2P63267 376 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 ZP4Q12836 540 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 KRR1Q13601 381 aaKnown RBP9.1□□□□□ -0.95
RAB5B-206ENST00000549505 ZNF239Q16600 458 aaKnown RBP9.1□□□□□ -0.95
RAB5B-206ENST00000549505 LINC01590Q5TEZ4 76 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 LIPKQ5VXJ0 399 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 GPR139Q6DWJ6 353 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 GUSBP11Q6P575 273 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 SLC29A4Q7RTT9 530 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 TPRA1Q86W33 373 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 SPRYD4Q8WW59 207 aaPredicted RBP9.1□□□□□ -0.95
RAB5B-206ENST00000549505 ASB15Q8WXK1 588 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 ZNF524Q96C55 264 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 KCTD12Q96CX2 325 aaKnown RBP9.1□□□□□ -0.95
RAB5B-206ENST00000549505 SECISBP2Q96T21 854 aaKnown RBP9.1□□□□□ -0.95
RAB5B-206ENST00000549505 COPS7AQ9UBW8 275 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 ST6GALNAC2Q9UJ37 374 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 NXT1Q9UKK6 140 aaKnown RBP9.1□□□□□ -0.95
RAB5B-206ENST00000549505 GSTK1Q9Y2Q3 226 aa9.1□□□□□ -0.95
RAB5B-206ENST00000549505 SPIN1Q9Y657 262 aaPredicted RBP9.1□□□□□ -0.95
RAB5B-206ENST00000549505 RNF13O43567 381 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 ICOSLGO75144 302 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 CD14P08571 375 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 SAGP10523 405 aaPredicted RBP9.09□□□□□ -0.95
RAB5B-206ENST00000549505 CD79BP40259 229 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 DUSP3P51452 185 aaPredicted RBP9.09□□□□□ -0.95
RAB5B-206ENST00000549505 DCDP81605 110 aaKnown RBP9.09□□□□□ -0.95
RAB5B-206ENST00000549505 CD300CQ08708 224 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 NSDHLQ15738 373 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 AGAP7PQ5VUJ5 663 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 VASH1Q7L8A9 365 aaPredicted RBP9.09□□□□□ -0.95
RAB5B-206ENST00000549505 STT3BQ8TCJ2 826 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 GPR119Q8TDV5 335 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 GRHL3Q8TE85 626 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 GATAD2BQ8WXI9 593 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 ACOT12Q8WYK0 555 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 RNF166Q96A37 237 aaPredicted RBP9.09□□□□□ -0.95
RAB5B-206ENST00000549505 OMA1Q96E52 524 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 PGLYRP3Q96LB9 341 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 LMF1Q96S06 567 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 KATNB1Q9BVA0 655 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 PTDSS2Q9BVG9 487 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 ALG8Q9BVK2 526 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 TRAV27A0A087WT01 109 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 MCIDASD6RGH6 385 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 PLD2O14939 933 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 DXOO77932 396 aaKnown RBP9.09□□□□□ -0.95
RAB5B-206ENST00000549505 PPP1R3DO95685 299 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 CER1O95813 267 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 MT-ND5P03915 603 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 CFPP27918 469 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 SDHAP31040 664 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 S100A5P33763 92 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 TMED10P49755 219 aaKnown RBP9.09□□□□□ -0.95
RAB5B-206ENST00000549505 RNF4P78317 190 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 LTBQ06643 244 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 NKAIN1Q4KMZ8 207 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 Q7L0L9 218 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 TMEM99Q8N816 258 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 ST8SIA1Q92185 356 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 AP3S1Q92572 193 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 TRAV36DV7A0A075B6V5 113 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 TRAV1-2A0A0B4J238 106 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 LOC100506127A0A0U1RQW1 187 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 OR2W5A6NFC9 320 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 A6NL46 340 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 C12orf71A8MTZ7 269 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 RGS9O75916 674 aaPredicted RBP9.09□□□□□ -0.95
RAB5B-206ENST00000549505 GLCEO94923 617 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 HIST1H1CP16403 213 aaKnown RBP9.09□□□□□ -0.95
RAB5B-206ENST00000549505 PGCP20142 388 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 F8A1P23610 371 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 SEPHS1P49903 392 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 LGALS3BPQ08380 585 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 CBFBQ13951 182 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 VWA2Q5GFL6 755 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 KCTD20Q7Z5Y7 419 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 Q8N9G6 341 aaPredicted RBP9.09□□□□□ -0.95
RAB5B-206ENST00000549505 EFHD2Q96C19 240 aaPredicted RBP9.09□□□□□ -0.95
RAB5B-206ENST00000549505 ITPKCQ96DU7 683 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 LOXL4Q96JB6 756 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 CCDC74BQ96LY2 380 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 CMTM3Q96MX0 182 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 SPSB2Q99619 263 aa9.09□□□□□ -0.95
RAB5B-206ENST00000549505 SLC30A2Q9BRI3 323 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms