RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 SLC22A6Q4U2R8 563 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 UTF1Q5T230 341 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 SLX4IPQ5VYV7 408 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 NCR3LG1Q68D85 454 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 PVRIGQ6DKI7 326 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 FBXL22Q6P050 247 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 PAMR1Q6UXH9 720 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 BAIAP2L2Q6UXY1 529 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 Q6ZR54 194 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 ZBTB8OSQ8IWT0 167 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 OR2T34Q8NGX1 318 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 TYMSOSQ8TAI1 123 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 FBXO30Q8TB52 745 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 OSTF1Q92882 214 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 C18orf25Q96B23 403 aaPredicted RBP3.08□□□□□ -1.92
PTCH1-216ENST00000548379 CLDN23Q96B33 292 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 ELSPBP1Q96BH3 223 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 PPP1R16AQ96I34 528 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 B3GALT6Q96L58 329 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 TPPP3Q9BW30 176 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 POLR3FQ9H1D9 316 aaPredicted RBP3.08□□□□□ -1.92
PTCH1-216ENST00000548379 RIBC2Q9H4K1 309 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 DHX33Q9H6R0 707 aaKnown RBP3.08□□□□□ -1.92
PTCH1-216ENST00000548379 HEBP1Q9NRV9 189 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 CUTCQ9NTM9 273 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 MARCH5Q9NX47 278 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 DCAF16Q9NXF7 216 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 SMC3Q9UQE7 1217 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 L3MBTL1Q9Y468 752 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 TANC1Q9C0D5 1861 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 SCN10AQ9Y5Y9 1956 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 SYNJ2BP-COX16A0A087WUM0 186 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 PPIAL4CA0A0B4J2A2 164 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 A8MX80 341 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 TRIM3O75382 744 aaPredicted RBP3.07□□□□□ -1.92
PTCH1-216ENST00000548379 STX11O75558 287 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 IGF1P05019 195 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 GIG44P09565 113 aaPredicted RBP3.07□□□□□ -1.92
PTCH1-216ENST00000548379 PPIAL4GP0DN37 164 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 GCFC2P16383 781 aaKnown RBP3.07□□□□□ -1.92
PTCH1-216ENST00000548379 PSMC3P17980 439 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 TPSB2P20231 275 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 NT5EP21589 574 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 IDSP22304 550 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 IGHV1-2P23083 117 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 CCNE1P24864 410 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 FASP25445 335 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 PSMA2P25787 234 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 PSMA5P28066 241 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 GDI1P31150 447 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 SOX6P35712 828 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 DLSTP36957 453 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 ARPP19P56211 112 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 RND3P61587 244 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 RPL8P62917 257 aaKnown RBP3.07□□□□□ -1.92
PTCH1-216ENST00000548379 NTHL1P78549 312 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 CXCL6P80162 114 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 PUDPQ08623 228 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 ZNF154Q13106 437 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 PLD1Q13393 1074 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 SLC10A1Q14973 349 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 ATXN7L3Q14CW9 347 aaPredicted RBP3.07□□□□□ -1.92
PTCH1-216ENST00000548379 TPSAB1Q15661 275 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 CHI3L2Q15782 390 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 TIMM50Q3ZCQ8 353 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 SLC25A30Q5SVS4 291 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 N4BP2L1Q5TBK1 243 aaPredicted RBP3.07□□□□□ -1.92
PTCH1-216ENST00000548379 MEDAGQ5VYS4 303 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 ZNF774Q6NX45 483 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 KDELC1Q6UW63 502 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 CES3Q6UWW8 571 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 LANCL3Q6ZV70 420 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 SERPINA9Q86WD7 417 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 IFNEQ86WN2 208 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 C9orf40Q8IXQ3 194 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 GPR137CQ8N3F9 429 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 Q8N9G6 341 aaPredicted RBP3.07□□□□□ -1.92
PTCH1-216ENST00000548379 KLHL30-AS1Q8NEE0 82 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 DENND6BQ8NEG7 585 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 OR9A4Q8NGU2 314 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 ITFG1Q8TB96 612 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 ING5Q8WYH8 240 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 ANKRD9Q96BM1 317 aaPredicted RBP3.07□□□□□ -1.92
PTCH1-216ENST00000548379 TADA1Q96BN2 335 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 TMEM80Q96HE8 168 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 CPB2Q96IY4 423 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 MBOAT7Q96N66 472 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 CCT8L2Q96SF2 557 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 LXNQ9BS40 222 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 CRACR2AQ9BSW2 395 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 DPH7Q9BTV6 452 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 RHOJQ9H4E5 214 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 C8orf33Q9H7E9 229 aaPredicted RBP3.07□□□□□ -1.92
PTCH1-216ENST00000548379 MRPL39Q9NYK5 338 aaKnown RBP3.07□□□□□ -1.92
PTCH1-216ENST00000548379 CHRNA9Q9UGM1 479 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 ANAPC7Q9UJX3 599 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 HES2Q9Y543 173 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 SPACA6W5XKT8 324 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 CHD7Q9P2D1 2997 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms