RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 HPCAP84074 193 aa17.46■□□□□ 0.39
GATC-202ENST00000548171 EFNB3Q15768 340 aa17.46■□□□□ 0.39
GATC-202ENST00000548171 OR4F3Q6IEY1 312 aa17.46■□□□□ 0.39
GATC-202ENST00000548171 CMIPQ8IY22 773 aa17.46■□□□□ 0.39
GATC-202ENST00000548171 CLEC4FQ8N1N0 589 aa17.46■□□□□ 0.39
GATC-202ENST00000548171 XAGE5Q8WWM1 108 aa17.46■□□□□ 0.39
GATC-202ENST00000548171 ROPN1LQ96C74 230 aa17.46■□□□□ 0.39
GATC-202ENST00000548171 SF3B5Q9BWJ5 86 aaKnown RBP17.46■□□□□ 0.39
GATC-202ENST00000548171 BPESC1Q9GZL8 116 aa17.46■□□□□ 0.39
GATC-202ENST00000548171 MKS1Q9NXB0 559 aa17.46■□□□□ 0.39
GATC-202ENST00000548171 TMED7Q9Y3B3 224 aa17.46■□□□□ 0.39
GATC-202ENST00000548171 OR12D1P0DN82 309 aa17.45■□□□□ 0.38
GATC-202ENST00000548171 PPOXP50336 477 aa17.45■□□□□ 0.38
GATC-202ENST00000548171 FRRS1Q6ZNA5 592 aa17.45■□□□□ 0.38
GATC-202ENST00000548171 AAED1Q7RTV5 226 aa17.45■□□□□ 0.38
GATC-202ENST00000548171 SPATA19Q7Z5L4 167 aa17.45■□□□□ 0.38
GATC-202ENST00000548171 ANKS4BQ8N8V4 417 aa17.45■□□□□ 0.38
GATC-202ENST00000548171 OR8J2Q8NGG1 315 aa17.45■□□□□ 0.38
GATC-202ENST00000548171 OR4A15Q8NGL6 344 aa17.45■□□□□ 0.38
GATC-202ENST00000548171 EPS8L3Q8TE67 593 aaKnown RBP17.45■□□□□ 0.38
GATC-202ENST00000548171 UBLCP1Q8WVY7 318 aaPredicted RBP17.45■□□□□ 0.38
GATC-202ENST00000548171 HPS1Q92902 700 aa17.45■□□□□ 0.38
GATC-202ENST00000548171 APOPT1Q96IL0 206 aa17.45■□□□□ 0.38
GATC-202ENST00000548171 ZNF317Q96PQ6 595 aaPredicted RBP17.45■□□□□ 0.38
GATC-202ENST00000548171 SLC38A2Q96QD8 506 aa17.45■□□□□ 0.38
GATC-202ENST00000548171 RAB1BQ9H0U4 201 aa17.45■□□□□ 0.38
GATC-202ENST00000548171 PLK3Q9H4B4 646 aa17.45■□□□□ 0.38
GATC-202ENST00000548171 MOV10Q9HCE1 1003 aaKnown RBP17.45■□□□□ 0.38
GATC-202ENST00000548171 TMEM45AQ9NWC5 275 aa17.45■□□□□ 0.38
GATC-202ENST00000548171 ASIC5Q9NY37 505 aa17.45■□□□□ 0.38
GATC-202ENST00000548171 NOP53Q9NZM5 478 aaKnown RBP17.45■□□□□ 0.38
GATC-202ENST00000548171 OSGIN1Q9UJX0 560 aa17.45■□□□□ 0.38
GATC-202ENST00000548171 IGHV1-18A0A0C4DH31 117 aa17.44■□□□□ 0.38
GATC-202ENST00000548171 FAAHO00519 579 aa17.44■□□□□ 0.38
GATC-202ENST00000548171 KLF11O14901 512 aa17.44■□□□□ 0.38
GATC-202ENST00000548171 SKAP2O75563 359 aaPredicted RBP17.44■□□□□ 0.38
GATC-202ENST00000548171 IMPDH2P12268 514 aa17.44■□□□□ 0.38
GATC-202ENST00000548171 UQCRBP14927 111 aa17.44■□□□□ 0.38
GATC-202ENST00000548171 CDH2P19022 906 aaPredicted RBP17.44■□□□□ 0.38
GATC-202ENST00000548171 UQCRC2P22695 453 aa17.44■□□□□ 0.38
GATC-202ENST00000548171 GIFP27352 417 aa17.44■□□□□ 0.38
GATC-202ENST00000548171 SLC1A3P43003 542 aa17.44■□□□□ 0.38
GATC-202ENST00000548171 KHKP50053 298 aa17.44■□□□□ 0.38
GATC-202ENST00000548171 EMX2Q04743 252 aa17.44■□□□□ 0.38
GATC-202ENST00000548171 FUT5Q11128 374 aa17.44■□□□□ 0.38
GATC-202ENST00000548171 SMU1Q2TAY7 513 aa17.44■□□□□ 0.38
GATC-202ENST00000548171 C3orf36Q3SXR2 165 aa17.44■□□□□ 0.38
GATC-202ENST00000548171 HIKESHIQ53FT3 197 aa17.44■□□□□ 0.38
GATC-202ENST00000548171 OTUD3Q5T2D3 398 aaPredicted RBP17.44■□□□□ 0.38
GATC-202ENST00000548171 RAB8BQ92930 207 aa17.44■□□□□ 0.38
GATC-202ENST00000548171 ZG16BQ96DA0 208 aa17.44■□□□□ 0.38
GATC-202ENST00000548171 TMEM72A0PK05 275 aa17.43■□□□□ 0.38
GATC-202ENST00000548171 KRT33AO76009 404 aa17.43■□□□□ 0.38
GATC-202ENST00000548171 ERCC1P07992 297 aaPredicted RBP17.43■□□□□ 0.38
GATC-202ENST00000548171 OR4A8P0C604 315 aa17.43■□□□□ 0.38
GATC-202ENST00000548171 TACR3P29371 465 aa17.43■□□□□ 0.38
GATC-202ENST00000548171 IDH3GP51553 393 aaPredicted RBP17.43■□□□□ 0.38
GATC-202ENST00000548171 CHN2P52757 468 aa17.43■□□□□ 0.38
GATC-202ENST00000548171 PLAURQ03405 335 aa17.43■□□□□ 0.38
GATC-202ENST00000548171 ADIPOQQ15848 244 aa17.43■□□□□ 0.38
GATC-202ENST00000548171 TNFAIP8L2Q6P589 184 aaPredicted RBP17.43■□□□□ 0.38
GATC-202ENST00000548171 UGT2A3Q6UWM9 527 aa17.43■□□□□ 0.38
GATC-202ENST00000548171 MEX3DQ86XN8 651 aaKnown RBP17.43■□□□□ 0.38
GATC-202ENST00000548171 ZIC4Q8N9L1 334 aa17.43■□□□□ 0.38
GATC-202ENST00000548171 EIF1ADQ8N9N8 165 aaKnown RBP17.43■□□□□ 0.38
GATC-202ENST00000548171 VPS37AQ8NEZ2 397 aa17.43■□□□□ 0.38
GATC-202ENST00000548171 OR9K2Q8NGE7 335 aa17.43■□□□□ 0.38
GATC-202ENST00000548171 ZIM3Q96PE6 472 aa17.43■□□□□ 0.38
GATC-202ENST00000548171 MECRQ9BV79 373 aa17.43■□□□□ 0.38
GATC-202ENST00000548171 TMEFF2Q9UIK5 374 aaPredicted RBP17.43■□□□□ 0.38
GATC-202ENST00000548171 SVEP1Q4LDE5 3571 aa17.43■□□□□ 0.38
GATC-202ENST00000548171 PRSS51A0A1B0GVH4 220 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 OR6C65A6NJZ3 312 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 AP3D1O14617 1153 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 SNUPNO95149 360 aaKnown RBP17.42■□□□□ 0.38
GATC-202ENST00000548171 STAMBPO95630 424 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 GPIP06744 558 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 UBE2NP61088 152 aaKnown RBP17.42■□□□□ 0.38
GATC-202ENST00000548171 ZSWIM7Q19AV6 140 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 TBRG1Q3YBR2 411 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 GPAT3Q53EU6 434 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 ANXA8L1Q5VT79 327 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 SAXO2Q658L1 398 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 OR4F15Q8NGB8 312 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 OR1K1Q8NGR3 316 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 CNOT9Q92600 299 aaKnown RBP17.42■□□□□ 0.38
GATC-202ENST00000548171 ZNF385AQ96PM9 386 aaKnown RBP17.42■□□□□ 0.38
GATC-202ENST00000548171 RHOXF2Q9BQY4 288 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 SOX7Q9BT81 388 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 CRNNQ9UBG3 495 aaPredicted RBP17.42■□□□□ 0.38
GATC-202ENST00000548171 ZDHHC2Q9UIJ5 367 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 PRDM4Q9UKN5 801 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 PCDHB14Q9Y5E9 798 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 DYSFO75923 2080 aa17.42■□□□□ 0.38
GATC-202ENST00000548171 ARPC4-TTLL3A0A0A6YYG9 625 aa17.41■□□□□ 0.38
GATC-202ENST00000548171 AGAP5A6NIR3 686 aa17.41■□□□□ 0.38
GATC-202ENST00000548171 AQP7P3A6NL99 342 aa17.41■□□□□ 0.38
GATC-202ENST00000548171 CLDN24A6NM45 220 aa17.41■□□□□ 0.38
GATC-202ENST00000548171 VSTM5A8MXK1 200 aa17.41■□□□□ 0.38
GATC-202ENST00000548171 ZNF587BE7ETH6 402 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms