RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 PIGQQ9BRB3 760 aa10.87□□□□□ -0.67
HDAC7-226ENST00000547259 TTYH2Q9BSA4 534 aa10.87□□□□□ -0.67
HDAC7-226ENST00000547259 FNDC11Q9BVV2 318 aa10.87□□□□□ -0.67
HDAC7-226ENST00000547259 SLC6A15Q9H2J7 730 aa10.87□□□□□ -0.67
HDAC7-226ENST00000547259 LDAHQ9H6V9 325 aa10.87□□□□□ -0.67
HDAC7-226ENST00000547259 ACER3Q9NUN7 267 aa10.87□□□□□ -0.67
HDAC7-226ENST00000547259 RHCGQ9UBD6 479 aa10.87□□□□□ -0.67
HDAC7-226ENST00000547259 PRDM4Q9UKN5 801 aa10.87□□□□□ -0.67
HDAC7-226ENST00000547259 SLC7A7Q9UM01 511 aa10.87□□□□□ -0.67
HDAC7-226ENST00000547259 A4GNTQ9UNA3 340 aa10.87□□□□□ -0.67
HDAC7-226ENST00000547259 MRPS18CQ9Y3D5 142 aaKnown RBP10.87□□□□□ -0.67
HDAC7-226ENST00000547259 TESMINQ9Y4I5 508 aa10.87□□□□□ -0.67
HDAC7-226ENST00000547259 AP4S1Q9Y587 144 aa10.87□□□□□ -0.67
HDAC7-226ENST00000547259 TMED7-TICAM2A0A0A6YYA0 188 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 OR2M5A3KFT3 312 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 C7orf72A4D263 438 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 ELOA3DA6NLF2 546 aaPredicted RBP10.86□□□□□ -0.67
HDAC7-226ENST00000547259 GNGT2O14610 69 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 CHP2O43745 196 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 ZIC3O60481 467 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 TIPRLO75663 272 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 CST1P01037 141 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 CCNA2P20248 432 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 CXCR1P25024 350 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 RRM2P31350 389 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 CDH12P55289 794 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 ELF3P78545 371 aaPredicted RBP10.86□□□□□ -0.67
HDAC7-226ENST00000547259 ST3GAL3Q11203 375 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 FOXD4Q12950 439 aaPredicted RBP10.86□□□□□ -0.67
HDAC7-226ENST00000547259 ELOA3BQ3SY89 546 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 SLC25A53Q5H9E4 307 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 ULK3Q6PHR2 472 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 TSEN54Q7Z6J9 526 aaKnown RBP10.86□□□□□ -0.67
HDAC7-226ENST00000547259 GTPBP8Q8N3Z3 284 aaPredicted RBP10.86□□□□□ -0.67
HDAC7-226ENST00000547259 PAPD5Q8NDF8 572 aaKnown RBP10.86□□□□□ -0.67
HDAC7-226ENST00000547259 ELOA3Q8NG57 546 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 POC1BQ8TC44 478 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 NPAS1Q99742 590 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 TMUB1Q9BVT8 246 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 CXXC4Q9H2H0 198 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 S100A14Q9HCY8 104 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 PNPLA3Q9NST1 481 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 ARMC1Q9NVT9 282 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 RIMS3Q9UJD0 308 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 FOXD3Q9UJU5 478 aaPredicted RBP10.86□□□□□ -0.67
HDAC7-226ENST00000547259 OSGIN1Q9UJX0 560 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 SLC6A5Q9Y345 797 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 TMED7Q9Y3B3 224 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 LIPGQ9Y5X9 500 aa10.86□□□□□ -0.67
HDAC7-226ENST00000547259 SPIN1Q9Y657 262 aaPredicted RBP10.86□□□□□ -0.67
HDAC7-226ENST00000547259 KIAA1549Q9HCM3 1950 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 TRGV5A0A0B4J1U4 118 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 HSPB2A8KAH6 182 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 H3BML4 177 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 ETV2O00321 342 aaPredicted RBP10.85□□□□□ -0.67
HDAC7-226ENST00000547259 FFAR1O14842 300 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 ADAMDEC1O15204 470 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 KRT36O76013 467 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 PRSS23O95084 383 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 GADD45GO95257 159 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 NTN1O95631 604 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 H1F0P07305 194 aaKnown RBP10.85□□□□□ -0.67
HDAC7-226ENST00000547259 GLI4P10075 376 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 THRBP10828 461 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 PNMTP11086 282 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 FCGR1AP12314 374 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 FOSL1P15407 271 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 DNASE1P24855 282 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 ELK4P28324 431 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 ADH6P28332 368 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 APOBEC1P41238 236 aaKnown RBP10.85□□□□□ -0.67
HDAC7-226ENST00000547259 KIR2DL3P43628 341 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 IST1P53990 364 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 DLX5P56178 289 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 SELENBP1Q13228 472 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 TRAM2Q15035 370 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 HSPB2Q16082 182 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 TMEM44Q2T9K0 475 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 IQCCQ4KMZ1 466 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 FGD3Q5JSP0 725 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 SWT1Q5T5J6 900 aaKnown RBP10.85□□□□□ -0.67
HDAC7-226ENST00000547259 C1orf185Q5T7R7 199 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 RIPPLY2Q5TAB7 128 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 OR2T5Q6IEZ7 315 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 C3orf33Q6P1S2 294 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 AAGABQ6PD74 315 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 ATG4DQ86TL0 474 aaPredicted RBP10.85□□□□□ -0.67
HDAC7-226ENST00000547259 TGIF2LYQ8IUE0 185 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 PIK3C3Q8NEB9 887 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 ATP6V1C2Q8NEY4 427 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 OR5M9Q8NGP3 310 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 OR2T29Q8NH02 315 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 SMPDL3BQ92485 455 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 POM121Q96HA1 1249 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 MPP4Q96JB8 637 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 POLDIP3Q9BY77 421 aaKnown RBP10.85□□□□□ -0.67
HDAC7-226ENST00000547259 ADAM19Q9H013 955 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 TMEM185BQ9H7F4 350 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 REEP1Q9H902 201 aa10.85□□□□□ -0.67
HDAC7-226ENST00000547259 C12orf10Q9HB07 376 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms