RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 IGHG4P01861 327 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 COX5AP20674 150 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 NT5EP21589 574 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 GLP1RP43220 463 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 TDO2P48775 406 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 KLK7P49862 253 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 PLA2G16P53816 162 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 TNFRSF17Q02223 184 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 ASPHQ12797 758 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 SNTB2Q13425 540 aaKnown RBP2.02□□□□□ -2.09
CCDC38-204ENST00000546816 CDC37Q16543 378 aaPredicted RBP2.02□□□□□ -2.09
CCDC38-204ENST00000546816 FAM83EQ2M2I3 478 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 CCDC57Q2TAC2 916 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 PIGGQ5H8A4 983 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 Q5W150 140 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 CNSTQ6PJW8 725 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 TMIGD1Q6UXZ0 262 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 PRSS41Q7RTY9 318 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 MOB3BQ86TA1 216 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 RDH10Q8IZV5 341 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 CENPLQ8N0S6 344 aaPredicted RBP2.02□□□□□ -2.09
CCDC38-204ENST00000546816 FTMTQ8N4E7 242 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 ZNF615Q8N8J6 731 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 OR8H1Q8NGG4 311 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 OR51G2Q8NGK0 314 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 RAET1EQ8TD07 263 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 SH3YL1Q96HL8 342 aaPredicted RBP2.02□□□□□ -2.09
CCDC38-204ENST00000546816 TSNARE1Q96NA8 513 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 KRTAP4-1Q9BYQ7 146 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 KRT23Q9C075 422 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 ROGDIQ9GZN7 287 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 POLR1EQ9GZS1 481 aaKnown RBP2.02□□□□□ -2.09
CCDC38-204ENST00000546816 SUDS3Q9H7L9 328 aaPredicted RBP2.02□□□□□ -2.09
CCDC38-204ENST00000546816 GNG12Q9UBI6 72 aa2.02□□□□□ -2.09
CCDC38-204ENST00000546816 PDS5BQ9NTI5 1447 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 FRMPD3Q5JV73 1810 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 KIF2AO00139 706 aaPredicted RBP2.01□□□□□ -2.09
CCDC38-204ENST00000546816 AGPAT2O15120 278 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 TAPBPO15533 448 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 LANCL1O43813 399 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 TPST2O60704 377 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 SCGB2A1O75556 95 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 KIAA0754O94854 1291 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 ADCY5O95622 1261 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 PLEKP08567 350 aaPredicted RBP2.01□□□□□ -2.09
CCDC38-204ENST00000546816 CALCBP10092 127 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 CALCRP30988 508 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 BIDP55957 195 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 NSUN5P1Q3KNT7 163 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 PARP15Q460N3 678 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 BOLA3Q53S33 107 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 ATL3Q6DD88 541 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 ERASQ7Z444 233 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 ZNF709Q8N972 641 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 FADS6Q8N9I5 356 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 DENND6BQ8NEG7 585 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 OR10G2Q8NGC3 310 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 RAB7BQ96AH8 199 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 TM4SF19Q96DZ7 209 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 ZNF578Q96N58 590 aaPredicted RBP2.01□□□□□ -2.09
CCDC38-204ENST00000546816 SPIN2AQ99865 258 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 SPIN2BQ9BPZ2 258 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 HDHD3Q9BSH5 251 aaPredicted RBP2.01□□□□□ -2.09
CCDC38-204ENST00000546816 RANBP3Q9H6Z4 567 aaPredicted RBP2.01□□□□□ -2.09
CCDC38-204ENST00000546816 DMAP1Q9NPF5 467 aaPredicted RBP2.01□□□□□ -2.09
CCDC38-204ENST00000546816 OPN4Q9UHM6 478 aa2.01□□□□□ -2.09
CCDC38-204ENST00000546816 CARMIL3Q8ND23 1372 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 SF3B1O75533 1304 aaKnown RBP eCLIP2□□□□□ -2.09
CCDC38-204ENST00000546816 A0A0U1RQS6 177 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 TRDCB7Z8K6 153 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 G3V4G9 280 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 BET1O15155 118 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 MAPK13O15264 365 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 TNFSF13O75888 250 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 PTBP3O95758 552 aaKnown RBP2□□□□□ -2.09
CCDC38-204ENST00000546816 CA1P00915 261 aaPredicted RBP2□□□□□ -2.09
CCDC38-204ENST00000546816 CAMLGP49069 296 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 ARRB1P49407 418 aaPredicted RBP2□□□□□ -2.09
CCDC38-204ENST00000546816 CUL1Q13616 776 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 UBE2SQ16763 222 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 TRIM16LQ309B1 348 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 C5orf47Q569G3 176 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 ZNF836Q6ZNA1 936 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 RALGPS2Q86X27 583 aaPredicted RBP2□□□□□ -2.09
CCDC38-204ENST00000546816 C6orf223Q8N319 242 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 OR2L8Q8NGY9 312 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 RAPGEF5Q92565 580 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 NDRG1Q92597 394 aaKnown RBP2□□□□□ -2.09
CCDC38-204ENST00000546816 PAGE5Q96GU1 130 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 TSG101Q99816 390 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 OMDQ99983 421 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 NXF5Q9H1B4 397 aaKnown RBP2□□□□□ -2.09
CCDC38-204ENST00000546816 GLRX2Q9NS18 164 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 AATFQ9NY61 560 aaKnown RBP eCLIP2□□□□□ -2.09
CCDC38-204ENST00000546816 COPS3Q9UNS2 423 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 KIF3AQ9Y496 699 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 MFHAS1Q9Y4C4 1052 aa2□□□□□ -2.09
CCDC38-204ENST00000546816 A6NIZ1 184 aa1.99□□□□□ -2.09
CCDC38-204ENST00000546816 DCTN6O00399 190 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms