RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 ZNF550Q7Z398 422 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 VTCN1Q7Z7D3 282 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 RANBP3LQ86VV4 465 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-211ENST00000546304 CHERPQ8IWX8 916 aaKnown RBP5.71□□□□□ -1.5
PRKDC-211ENST00000546304 EID3Q8N140 333 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 FAM86B1Q8N7N1 296 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 ST6GALNAC3Q8NDV1 305 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 ZNF563Q8TA94 476 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 VANGL1Q8TAA9 524 aaPredicted RBP5.71□□□□□ -1.5
PRKDC-211ENST00000546304 GPR119Q8TDV5 335 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 GEMIN6Q8WXD5 167 aaKnown RBP5.71□□□□□ -1.5
PRKDC-211ENST00000546304 TMEM234Q8WY98 164 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 LZICQ8WZA0 190 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 MIB2Q96AX9 1013 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 TPD52L3Q96J77 140 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 MRGPRX4Q96LA9 322 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 NSMCE2Q96MF7 247 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 NPAS1Q99742 590 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 PIGQQ9BRB3 760 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 PCDHAC1Q9H158 963 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 DEFB127Q9H1M4 99 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 EVA1AQ9H8M9 152 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 ADPRHL2Q9NX46 363 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 RPS6KA6Q9UK32 745 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 BAG5Q9UL15 447 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 SAMD4AQ9UPU9 718 aaKnown RBP5.71□□□□□ -1.5
PRKDC-211ENST00000546304 SLC6A5Q9Y345 797 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 MRPS18CQ9Y3D5 142 aaKnown RBP5.71□□□□□ -1.5
PRKDC-211ENST00000546304 V9GYQ6 96 aa5.71□□□□□ -1.5
PRKDC-211ENST00000546304 ANKHD1Q8IWZ3 2542 aaKnown RBP5.71□□□□□ -1.5
PRKDC-211ENST00000546304 NCOA6Q14686 2063 aaPredicted RBP5.7□□□□□ -1.5
PRKDC-211ENST00000546304 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 A0A1B0GTH9 108 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 A0A1B0GVC2 190 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 H3BML4 177 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 BCKDKO14874 412 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 TBX1O43435 398 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 ZIC3O60481 467 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 FMO6PO60774 539 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 SLC19A2O60779 497 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 WISP2O76076 250 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 STAMBPO95630 424 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 LGI1O95970 557 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 ACTL6AO96019 429 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 IFNW1P05000 195 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 INHBBP09529 407 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 GP1BBP13224 206 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 ABOP16442 354 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 TNFRSF1BP20333 461 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 CHMP24386 653 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 PSMA4P25789 261 aaKnown RBP5.7□□□□□ -1.5
PRKDC-211ENST00000546304 ACAA2P42765 397 aaKnown RBP5.7□□□□□ -1.5
PRKDC-211ENST00000546304 SLC1A3P43003 542 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 IDH2P48735 452 aaKnown RBP5.7□□□□□ -1.5
PRKDC-211ENST00000546304 LHX2P50458 406 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 POLR2HP52434 150 aaKnown RBP5.7□□□□□ -1.5
PRKDC-211ENST00000546304 DLX5P56178 289 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 SESN3P58005 492 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 COPZ1P61923 177 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 HOXC5Q00444 222 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 MERTKQ12866 999 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 SELENBP1Q13228 472 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 FLOT2Q14254 428 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 TRIM25Q14258 630 aaKnown RBP5.7□□□□□ -1.5
PRKDC-211ENST00000546304 NPTX1Q15818 432 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 C3AR1Q16581 482 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 GLYR1Q49A26 553 aaPredicted RBP5.7□□□□□ -1.5
PRKDC-211ENST00000546304 IFI44LQ53G44 452 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 SLC25A53Q5H9E4 307 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 MTX3Q5HYI7 312 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 NHSL2Q5HYW2 709 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 GLYATQ6IB77 296 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 WBP2NLQ6ICG8 309 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 ENPP6Q6UWR7 440 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 DEF8Q6ZN54 512 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 PLEKHM3Q6ZWE6 761 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 ASRGL1Q7L266 308 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 GRINAQ7Z429 371 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 FGD2Q7Z6J4 655 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 CARM1Q86X55 608 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 LACC1Q8IV20 430 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 CADM2Q8N3J6 435 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 OR52E4Q8NGH9 312 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 OR4D11Q8NGI4 311 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 OR6T1Q8NGN1 323 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 OR5M1Q8NGP8 315 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 OR10Q1Q8NGQ4 319 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 POC1BQ8TC44 478 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 SMPDL3BQ92485 455 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 ABTB1Q969K4 478 aaPredicted RBP5.7□□□□□ -1.5
PRKDC-211ENST00000546304 SARAFQ96BY9 339 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 ZNF524Q96C55 264 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 WFDC6Q9BQY6 131 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 UGT2B28Q9BY64 529 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 CADM1Q9BY67 442 aaKnown RBP5.7□□□□□ -1.5
PRKDC-211ENST00000546304 TRIM15Q9C019 465 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 TMEM185BQ9H7F4 350 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 GORASP2Q9H8Y8 452 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 ACER3Q9NUN7 267 aa5.7□□□□□ -1.5
PRKDC-211ENST00000546304 DCAF13Q9NV06 445 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms