RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 C6orf52Q5T4I8 152 aa12.39□□□□□ -0.43
DDX11-228ENST00000545115 C1QTNF12Q5T7M4 302 aa12.39□□□□□ -0.43
DDX11-228ENST00000545115 C9orf135Q5VTT2 229 aa12.39□□□□□ -0.43
DDX11-228ENST00000545115 OGFOD2Q6N063 350 aa12.39□□□□□ -0.43
DDX11-228ENST00000545115 PAQR6Q6TCH4 344 aa12.39□□□□□ -0.43
DDX11-228ENST00000545115 LRRC74BQ6ZQY2 392 aa12.39□□□□□ -0.43
DDX11-228ENST00000545115 ELOA3Q8NG57 546 aa12.39□□□□□ -0.43
DDX11-228ENST00000545115 WDR60Q8WVS4 1066 aa12.39□□□□□ -0.43
DDX11-228ENST00000545115 HTRA1Q92743 480 aa12.39□□□□□ -0.43
DDX11-228ENST00000545115 PANX1Q96RD7 426 aa12.39□□□□□ -0.43
DDX11-228ENST00000545115 TNFRSF13CQ96RJ3 184 aa12.39□□□□□ -0.43
DDX11-228ENST00000545115 C1QTNF6Q9BXI9 259 aa12.39□□□□□ -0.43
DDX11-228ENST00000545115 FKRPQ9H9S5 495 aa12.39□□□□□ -0.43
DDX11-228ENST00000545115 MEAF6Q9HAF1 191 aa12.39□□□□□ -0.43
DDX11-228ENST00000545115 SLC17A5Q9NRA2 495 aa12.39□□□□□ -0.43
DDX11-228ENST00000545115 SLC7A10Q9NS82 523 aa12.39□□□□□ -0.43
DDX11-228ENST00000545115 CFAP73A6NFT4 308 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 CCDC154A6NI56 674 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 RNF212BA8MTL3 300 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 C1QCP02747 245 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 BMP4P12644 408 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 IL7RP16871 459 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 RPS4Y1P22090 263 aaKnown RBP12.38□□□□□ -0.43
DDX11-228ENST00000545115 VLDLRP98155 873 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 LOXL1Q08397 574 aaPredicted RBP12.38□□□□□ -0.43
DDX11-228ENST00000545115 LRRC74AQ0VAA2 488 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 EPS8Q12929 822 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 MRPL2Q5T653 305 aaKnown RBP12.38□□□□□ -0.43
DDX11-228ENST00000545115 TSPO2Q5TGU0 170 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 WDR93Q6P2C0 686 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 MREGQ8N565 214 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 ZNF525Q8N782 197 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 WDR31Q8NA23 367 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 FAM168AQ92567 244 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 TMEM45BQ96B21 275 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 TEX37Q96LM6 180 aa12.38□□□□□ -0.43
DDX11-228ENST00000545115 MTHFD2LQ9H903 347 aaPredicted RBP12.38□□□□□ -0.43
DDX11-228ENST00000545115 FBN1P35555 2871 aaKnown RBP12.38□□□□□ -0.43
DDX11-228ENST00000545115 ZC3H12DA2A288 527 aaKnown RBP12.37□□□□□ -0.43
DDX11-228ENST00000545115 PGRP06401 933 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 GPIP06744 558 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 DBIP07108 87 aaKnown RBP12.37□□□□□ -0.43
DDX11-228ENST00000545115 CSF3P09919 207 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 ALDOCP09972 364 aaKnown RBP12.37□□□□□ -0.43
DDX11-228ENST00000545115 NR2F1P10589 423 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 BGNP21810 368 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 MPGP29372 298 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 NME5P56597 212 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 UFM1P61960 85 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 SLC25A3Q00325 362 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 CHRNB3Q05901 458 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 STX3Q13277 289 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 OTUD3Q5T2D3 398 aaPredicted RBP12.37□□□□□ -0.43
DDX11-228ENST00000545115 KLHL24Q6TFL4 600 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 ZNF621Q6ZSS3 439 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 PEX5LQ8IYB4 626 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 ZNF440Q8IYI8 595 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 OR52E6Q96RD3 313 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 SF3B5Q9BWJ5 86 aaKnown RBP12.37□□□□□ -0.43
DDX11-228ENST00000545115 ADAM19Q9H013 955 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 MANSC1Q9H8J5 431 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 AIG1Q9NVV5 245 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 CDC42EP3Q9UKI2 254 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 ATP23Q9Y6H3 246 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 ALPK2Q86TB3 2170 aa12.37□□□□□ -0.43
DDX11-228ENST00000545115 LIPT2A6NK58 231 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 WNT11O96014 354 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 FAM157CP0CG43 387 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 CXCR1P25024 350 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 IL12AP29459 219 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 APOBEC3AP31941 199 aaPredicted RBP12.36□□□□□ -0.43
DDX11-228ENST00000545115 CDKN2CP42773 168 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 EFNA4P52798 201 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 PRPS1P60891 318 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 CEACAM7Q14002 265 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 GSTA3Q16772 222 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 COX20Q5RI15 118 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 AAED1Q7RTV5 226 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 ABHD12BQ7Z5M8 362 aaPredicted RBP12.36□□□□□ -0.43
DDX11-228ENST00000545115 LSRQ86X29 649 aaPredicted RBP12.36□□□□□ -0.43
DDX11-228ENST00000545115 POMGNT2Q8NAT1 580 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 OR9K2Q8NGE7 335 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 PNPT1Q8TCS8 783 aaKnown RBP12.36□□□□□ -0.43
DDX11-228ENST00000545115 C10orf105Q8TEF2 133 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 PIF1Q9H611 641 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 PNPOQ9NVS9 261 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 TMEM160Q9NX00 188 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 PRDM4Q9UKN5 801 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 PMF1-BGLAPU3KQ54 211 aa12.36□□□□□ -0.43
DDX11-228ENST00000545115 AQP7P3A6NL99 342 aa12.35□□□□□ -0.43
DDX11-228ENST00000545115 ATP6V1G2-DDX39BF2Z307 99 aa12.35□□□□□ -0.43
DDX11-228ENST00000545115 SDHDO14521 159 aa12.35□□□□□ -0.43
DDX11-228ENST00000545115 AKR7A3O95154 331 aa12.35□□□□□ -0.43
DDX11-228ENST00000545115 KRT75O95678 551 aa12.35□□□□□ -0.43
DDX11-228ENST00000545115 GSNP06396 782 aa12.35□□□□□ -0.43
DDX11-228ENST00000545115 BST1Q10588 318 aa12.35□□□□□ -0.43
DDX11-228ENST00000545115 OR7A5Q15622 319 aa12.35□□□□□ -0.43
DDX11-228ENST00000545115 LIN52Q52LA3 116 aa12.35□□□□□ -0.43
DDX11-228ENST00000545115 SPATA19Q7Z5L4 167 aa12.35□□□□□ -0.43
DDX11-228ENST00000545115 GPAT4Q86UL3 456 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms