RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 SELENONQ9NZV5 590 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 SLC9A8Q9Y2E8 581 aa10.49□□□□□ -0.73
HDAC4-216ENST00000544989 NOSIPQ9Y314 301 aaKnown RBP10.49□□□□□ -0.73
HDAC4-216ENST00000544989 DEFB108AA8MXU0 73 aa10.48□□□□□ -0.73
HDAC4-216ENST00000544989 MRPL33O75394 65 aaKnown RBP10.48□□□□□ -0.73
HDAC4-216ENST00000544989 PNMTP11086 282 aa10.48□□□□□ -0.73
HDAC4-216ENST00000544989 CCNA2P20248 432 aa10.48□□□□□ -0.73
HDAC4-216ENST00000544989 FPR1P21462 350 aa10.48□□□□□ -0.73
HDAC4-216ENST00000544989 ART1P52961 327 aa10.48□□□□□ -0.73
HDAC4-216ENST00000544989 TESK1Q15569 626 aa10.48□□□□□ -0.73
HDAC4-216ENST00000544989 TRMT5Q32P41 509 aaKnown RBP10.48□□□□□ -0.73
HDAC4-216ENST00000544989 MMEL1Q495T6 779 aa10.48□□□□□ -0.73
HDAC4-216ENST00000544989 FAM91A1Q658Y4 838 aa10.48□□□□□ -0.73
HDAC4-216ENST00000544989 SERPINA11Q86U17 422 aa10.48□□□□□ -0.73
HDAC4-216ENST00000544989 RANBP3LQ86VV4 465 aaPredicted RBP10.48□□□□□ -0.73
HDAC4-216ENST00000544989 CXorf67Q86X51 503 aaPredicted RBP10.48□□□□□ -0.73
HDAC4-216ENST00000544989 ARMC8Q8IUR7 673 aa10.48□□□□□ -0.73
HDAC4-216ENST00000544989 LSMEM1Q8N8F7 131 aa10.48□□□□□ -0.73
HDAC4-216ENST00000544989 PCYOX1LQ8NBM8 494 aa10.48□□□□□ -0.73
HDAC4-216ENST00000544989 RASSF5Q8WWW0 418 aa10.48□□□□□ -0.73
HDAC4-216ENST00000544989 APH1AQ96BI3 265 aa10.48□□□□□ -0.73
HDAC4-216ENST00000544989 PIK3IP1Q96FE7 263 aa10.48□□□□□ -0.73
HDAC4-216ENST00000544989 KLHL14Q9P2G3 628 aa10.48□□□□□ -0.73
HDAC4-216ENST00000544989 TESQ9UGI8 421 aaKnown RBP10.48□□□□□ -0.73
HDAC4-216ENST00000544989 ING1Q9UK53 422 aaPredicted RBP10.48□□□□□ -0.73
HDAC4-216ENST00000544989 OR6C65A6NJZ3 312 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 LIPT2A6NK58 231 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 ELOA3DA6NLF2 546 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-216ENST00000544989 ZNF716A6NP11 495 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 OR2T1O43869 369 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 TMCC2O75069 709 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 AHSA1O95433 338 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 ADAP00813 363 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 C8BP07358 591 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 IST1P53990 364 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 GUCY1A3Q02108 690 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 MFSD13AQ14CX5 517 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 ADRM1Q16186 407 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 ELOA3BQ3SY89 546 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 SWT1Q5T5J6 900 aaKnown RBP10.47□□□□□ -0.73
HDAC4-216ENST00000544989 C1orf140Q5VVS0 124 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 FBXW9Q5XUX1 488 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 ULK3Q6PHR2 472 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 C6orf89Q6UWU4 347 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 C20orf204Q6ZNR8 217 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 BHLHA15Q7RTS1 189 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-216ENST00000544989 NET1Q7Z628 596 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-216ENST00000544989 PATL1Q86TB9 770 aaKnown RBP10.47□□□□□ -0.73
HDAC4-216ENST00000544989 ATG4DQ86TL0 474 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-216ENST00000544989 ELOA3Q8NG57 546 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 OR8J3Q8NGG0 315 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 PIGTQ969N2 578 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 C3orf49Q96BT1 292 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 MUCL1Q96DR8 90 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 ZC3HAV1LQ96H79 300 aaKnown RBP10.47□□□□□ -0.73
HDAC4-216ENST00000544989 ZNF300Q96RE9 604 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-216ENST00000544989 CXXC4Q9H2H0 198 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 KAT8Q9H7Z6 458 aaKnown RBP10.47□□□□□ -0.73
HDAC4-216ENST00000544989 TMEM27Q9HBJ8 222 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 BEX4Q9NWD9 120 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-216ENST00000544989 GID8Q9NWU2 228 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 C6orf203Q9P0P8 240 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-216ENST00000544989 AP3M1Q9Y2T2 418 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 CHST2Q9Y4C5 530 aa10.47□□□□□ -0.73
HDAC4-216ENST00000544989 AQP7P3A6NL99 342 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 TMEM229AB2RXF0 380 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 ZNF814B7Z6K7 855 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 FMO6PO60774 539 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 NPIPB7O75200 414 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 ATE1O95260 518 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 IMPDH2P12268 514 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 PRG2P13727 222 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 COX5AP20674 150 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 GTF2E2P29084 291 aaKnown RBP10.46□□□□□ -0.73
HDAC4-216ENST00000544989 PCGF2P35227 344 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 MDH1P40925 334 aaKnown RBP10.46□□□□□ -0.73
HDAC4-216ENST00000544989 RGS8P57771 180 aaPredicted RBP10.46□□□□□ -0.73
HDAC4-216ENST00000544989 TGFBR3Q03167 851 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 CEACAM7Q14002 265 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 SLC17A1Q14916 467 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 POU4F3Q15319 338 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 OR7A5Q15622 319 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 OTUD3Q5T2D3 398 aaPredicted RBP10.46□□□□□ -0.73
HDAC4-216ENST00000544989 ANKRD34AQ69YU3 496 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 OR7E24Q6IFN5 339 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 ABHD12BQ7Z5M8 362 aaPredicted RBP10.46□□□□□ -0.73
HDAC4-216ENST00000544989 RETREG3Q86VR2 466 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 UBE2J2Q8N2K1 259 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 OR52E4Q8NGH9 312 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 MFSD8Q8NHS3 518 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 SLC38A4Q969I6 547 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 TMEM45BQ96B21 275 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 S100PBPQ96BU1 408 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 SLC47A1Q96FL8 570 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 POM121Q96HA1 1249 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 EPYCQ99645 322 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 PIP5K1AQ99755 562 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 IKZF5Q9H5V7 419 aa10.46□□□□□ -0.73
HDAC4-216ENST00000544989 ESRP2Q9H6T0 727 aaKnown RBP10.46□□□□□ -0.73
HDAC4-216ENST00000544989 CCM2LQ9NUG4 571 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms