RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 LKAAEAR1Q8TD35 194 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 GHSRQ92847 366 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 BORCS7Q96B45 105 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 NEURL3Q96EH8 262 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 CNTNAP3Q9BZ76 1288 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 NXF5Q9H1B4 397 aaKnown RBP12.21□□□□□ -0.45
TNC-212ENST00000542877 SLC38A1Q9H2H9 487 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 ACKR4Q9NPB9 350 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 SPATA6Q9NWH7 488 aaPredicted RBP12.21□□□□□ -0.45
TNC-212ENST00000542877 CPNE7Q9UBL6 633 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 RPH3AQ9Y2J0 694 aaPredicted RBP12.21□□□□□ -0.45
TNC-212ENST00000542877 NME7Q9Y5B8 376 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 HOXB5P09067 269 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 GPX2P18283 190 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 FAM3CQ92520 227 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 ANKRD19PQ9H560 264 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 TRDV1A0A1B0GX56 115 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 OR2A25A4D2G3 310 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 FABP7O15540 132 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 APEX1P27695 318 aaKnown RBP12.21□□□□□ -0.45
TNC-212ENST00000542877 HLA-FP30511 346 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 SEC61A1P61619 476 aaKnown RBP12.21□□□□□ -0.45
TNC-212ENST00000542877 GPR176Q14439 515 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 RBM39Q14498 530 aaKnown RBP12.21□□□□□ -0.45
TNC-212ENST00000542877 KDM4DQ6B0I6 523 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 COX15Q7KZN9 410 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 LYSMD2Q8IV50 215 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 ZNF595Q8IYB9 648 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 OR4K15Q8NH41 348 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 PHYHIPQ92561 330 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 EMC7Q9NPA0 242 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 PLCXD1Q9NUJ7 323 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 CAMK2AQ9UQM7 478 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 HS3ST2Q9Y278 367 aa12.21□□□□□ -0.45
TNC-212ENST00000542877 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.21□□□□□ -0.46
TNC-212ENST00000542877 HIDE1A8MVS5 230 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 ONECUT3O60422 494 aaPredicted RBP12.21□□□□□ -0.46
TNC-212ENST00000542877 MED6O75586 246 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 CPNE6O95741 557 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 OR8G3PP0DMU2 310 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 PTBP1P26599 531 aaKnown RBP eCLIP12.21□□□□□ -0.46
TNC-212ENST00000542877 CD79BP40259 229 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 RAB38P57729 211 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 CLDN2P57739 230 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 GPLD1P80108 840 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 HTD2P86397 168 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 CTBSQ01459 385 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 BTN1A1Q13410 526 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 LTB4RQ15722 352 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 Q499Y3 187 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 C5orf46Q6UWT4 87 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 TAS1R1Q7RTX1 841 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 MKXQ8IYA7 352 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 OR56B1Q8NGI3 324 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 OR5M11Q96RB7 305 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 INSM2Q96T92 566 aaPredicted RBP12.21□□□□□ -0.46
TNC-212ENST00000542877 SCN11AQ9UI33 1791 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 KDM4EB2RXH2 506 aaPredicted RBP12.21□□□□□ -0.46
TNC-212ENST00000542877 ZNF264O43296 627 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 GALR3O60755 368 aaPredicted RBP12.21□□□□□ -0.46
TNC-212ENST00000542877 TCRBP04435 133 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 F3P13726 295 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 SERPINA2P20848 420 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 RPE65Q16518 533 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 SLX4IPQ5VYV7 408 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 IDO2Q6ZQW0 420 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 GAREM2Q75VX8 874 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 LGALS14Q8TCE9 139 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 RSC1A1Q92681 617 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 RSPRY1Q96DX4 576 aa12.21□□□□□ -0.46
TNC-212ENST00000542877 C11orf54Q9H0W9 315 aaPredicted RBP12.21□□□□□ -0.46
TNC-212ENST00000542877 ACOD1A6NK06 481 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 TIMP1P01033 207 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 CD79AP11912 226 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 SHC1P29353 583 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 RAB5CP51148 216 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 PCBD1P61457 104 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 ALKAL2Q6UX46 152 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 PRR18Q8N4B5 295 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 OR4D6Q8NGJ1 314 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 LIN37Q96GY3 246 aaPredicted RBP12.2□□□□□ -0.46
TNC-212ENST00000542877 ALG12Q9BV10 488 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 PCDHGA6Q9Y5G7 932 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 SNX11Q9Y5W9 270 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 HSBP1L1C9JCN9 74 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 ETV5P41161 510 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 POU3F1Q03052 451 aaPredicted RBP12.2□□□□□ -0.46
TNC-212ENST00000542877 TBPL2Q6SJ96 375 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 CELF2-AS1Q8N7Q2 184 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 NLGN4YQ8NFZ3 816 aaPredicted RBP12.2□□□□□ -0.46
TNC-212ENST00000542877 OR6T1Q8NGN1 323 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 OR52N1Q8NH53 320 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 HAS2Q92819 552 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 ZNF286AQ9HBT8 521 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 NOX4Q9NPH5 578 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 ETV7Q9Y603 341 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 D6RAR5 112 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 FADS1O60427 444 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 HTR2CP28335 458 aa12.2□□□□□ -0.46
TNC-212ENST00000542877 HOXA9P31269 272 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms