RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 ELLP55199 621 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 VSX2P58304 361 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 TAS2R38P59533 333 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 PITPNAQ00169 270 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 HOXC5Q00444 222 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 MYL7Q01449 175 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 CRYZQ08257 329 aaKnown RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 IL24Q13007 206 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 OR2F1Q13607 317 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 ENPP2Q13822 863 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 C1DQ13901 141 aaKnown RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 IL18Q14116 193 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 GAMTQ14353 236 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 GPR176Q14439 515 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 SLC17A1Q14916 467 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 ABRAXAS2Q15018 415 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 PCBP2Q15366 365 aaKnown RBP eCLIP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 SURF2Q15527 256 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 TSNQ15631 228 aaKnown RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 TAF9Q16594 264 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 TAZQ16635 292 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 NDUFA9Q16795 377 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 UGT8Q16880 541 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 FAM187BQ17R55 369 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 GSG1Q2KHT4 349 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 VMACQ2NL98 169 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 SCGB2B2Q4G0G5 96 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 FBXO47Q5MNV8 452 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 PRAMEF18Q5VWM3 479 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 PRAMEF8Q5VWM4 474 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 PRAMEF7Q5VXH5 474 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 KCTD11Q693B1 232 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 ZNF660Q6AZW8 331 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 OR4F3Q6IEY1 312 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 DENND1BQ6P3S1 775 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 TMEM88Q6PEY1 159 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 TBPL2Q6SJ96 375 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 TEPPQ6URK8 271 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 DRAM2Q6UX65 266 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 DPY19L2P2Q6ZN68 376 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 AHSA2Q719I0 299 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 LARP4Q71RC2 724 aaKnown RBP eCLIP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 FAM220AQ7Z4H9 259 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 ABI3BPQ7Z7G0 1075 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 TMEM135Q86UB9 458 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 PIGZQ86VD9 579 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 THOC6Q86W42 341 aaKnown RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 NRROSQ86YC3 692 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 CBWD2Q8IUF1 395 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 CBLN2Q8IUK8 224 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 CILP2Q8IUL8 1156 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 TRAPPC5Q8IUR0 188 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 LAX1Q8IWV1 398 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 CNTN4Q8IWV2 1026 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 C9orf40Q8IXQ3 194 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 MIER2Q8N344 545 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 COMMD1Q8N668 190 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 ACTL9Q8TC94 416 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 GGHQ92820 318 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 FAM162AQ96A26 154 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 TMEM125Q96AQ2 219 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 ZBTB8AQ96BR9 441 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 ULK4Q96C45 1275 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 ARSGQ96EG1 525 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 SAT2Q96F10 170 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 EEF2KMTQ96G04 330 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 CERS2Q96G23 380 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 P2RY11Q96G91 374 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 RAX2Q96IS3 184 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 MRGPRX1Q96LB2 322 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 PACRGQ96M98 296 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 NECTIN4Q96NY8 510 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 RNF2Q99496 336 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 VAT1Q99536 393 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 EPYCQ99645 322 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 MGLLQ99685 303 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 CMKLR1Q99788 373 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 PRRX2Q99811 253 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 EGFL8Q99944 293 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 MRPL57Q9BQC6 102 aaKnown RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 SULT4A1Q9BR01 284 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 WDR83Q9BRX9 315 aaKnown RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 PBDC1Q9BVG4 233 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 GATA5Q9BWX5 397 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 AMNQ9BXJ7 453 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 GABARAPL3Q9BY60 117 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 POLR3FQ9H1D9 316 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 OR10A4Q9H209 315 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 PRDM12Q9H4Q4 367 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 WDCPQ9H6R7 721 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 WDR55Q9H6Y2 383 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 ZNF552Q9H707 407 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 ZNF430Q9H8G1 570 aaPredicted RBP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 SEC61A2Q9H9S3 476 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 NMRAL1Q9HBL8 299 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 NMRK2Q9NPI5 230 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 SLAMF7Q9NQ25 335 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 LHX9Q9NQ69 397 aa4.01□□□□□ -1.77
SNHG1-219ENST00000542112 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.01□□□□□ -1.77
SNHG1-219ENST00000542112 ZNF302Q9NR11 478 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms