RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 FOXL2P58012 376 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 NDUFA9Q16795 377 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 ST3GAL2Q16842 350 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 GUSBP11Q6P575 273 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 OR2A1Q8NGT9 310 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 CDS1Q92903 461 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 GSDMCQ9BYG8 508 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 GSX2Q9BZM3 304 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 SRMSQ9H3Y6 488 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 PELI2Q9HAT8 420 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 ACSL5Q9ULC5 683 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 TNFRSF10CO14798 259 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 MAGEB4O15481 346 aaPredicted RBP13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 HCN1O60741 890 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 KCNJ13O60928 360 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 HLA-DPB1P04440 258 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 GABRA5P31644 462 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 ANXA11P50995 505 aaKnown RBP13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 PPP3R1P63098 170 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 MAMSTRQ6ZN01 415 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 QSOX2Q6ZRP7 698 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 GPAT4Q86UL3 456 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 NR2C2APQ86WQ0 139 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 LINC00518Q8N0U6 118 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 OR51A7Q8NH64 312 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 RNF215Q9Y6U7 377 aa13.2□□□□□ -0.3
SFSWAP-210ENST00000541286 EIF4EP06730 217 aaKnown RBP13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 TEAD1P28347 426 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 DSG2Q14126 1118 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 MINDY4Q4G0A6 757 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 RPTNQ6XPR3 784 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 FAM181AQ8N9Y4 354 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 OR51L1Q8NGJ5 315 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 MOSPD2Q8NHP6 518 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 NXPE2Q96DL1 559 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 SFXN2Q96NB2 322 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 ABHD1Q96SE0 405 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 USB1Q9BQ65 265 aaKnown RBP13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 SEC22CQ9BRL7 303 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 SLC38A1Q9H2H9 487 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 RANBP3Q9H6Z4 567 aaPredicted RBP13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 HINT3Q9NQE9 182 aaKnown RBP13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 HRASLS2Q9NWW9 162 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 ATPIF1Q9UII2 106 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 FBXO4Q9UKT5 387 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 BAIAP2Q9UQB8 552 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 EXOSC1Q9Y3B2 195 aaKnown RBP13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 MAB21L2Q9Y586 359 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 KCNMB2Q9Y691 235 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 CACNA1GO43497 2377 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 ARID1AO14497 2285 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 A0A0A6YYD5 115 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 CENPVL1A0A0U1RR11 272 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 CDC42EP2O14613 210 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 GALR2O43603 387 aaPredicted RBP13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 SAGP10523 405 aaPredicted RBP13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 SHC1P29353 583 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 HNRNPKP61978 463 aaKnown RBP eCLIP13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 DEFB134Q4QY38 66 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 SIRT6Q8N6T7 355 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 GRHL3Q8TE85 626 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 RFKQ969G6 155 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 SLC41A3Q96GZ6 507 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 ARHGAP9Q9BRR9 750 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 LRIT1Q9P2V4 623 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 ACAD8Q9UKU7 415 aa13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 TNRC6BQ9UPQ9 1833 aaKnown RBP13.19□□□□□ -0.3
SFSWAP-210ENST00000541286 PRG2P13727 222 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 ATP5A1P25705 553 aaKnown RBP13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 HOXA6P31267 233 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 RAB28P51157 221 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 TSPAN31Q12999 210 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 CAMK2DQ13557 499 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 TPBGQ13641 420 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 SLC6A19Q695T7 634 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 GIMAP1Q8WWP7 306 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 MS4A6EQ96DS6 147 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 TMEM5Q9Y2B1 443 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 WDR45Q9Y484 360 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 PCDHGB7Q9Y5F8 929 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 MAP1BP46821 2468 aaKnown RBP13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 DAPL1A0PJW8 107 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 SLC22A23A1A5C7 686 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 J3QLW9 94 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 LPLP06858 475 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 DRD2P14416 443 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 ZNF19P17023 458 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 NOS3P29474 1203 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 CTAG1AP78358 180 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 CFHR1Q03591 330 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 ZNF273Q14593 569 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 ELOCQ15369 112 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 CXXC5Q7LFL8 322 aaKnown RBP13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 WNT2BQ93097 391 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 RFT1Q96AA3 541 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 NARS2Q96I59 477 aaKnown RBP13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 TGM7Q96PF1 710 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 CACNG6Q9BXT2 260 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 RNF32Q9H0A6 362 aa13.18□□□□□ -0.3
SFSWAP-210ENST00000541286 PCBD2Q9H0N5 130 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms